Gene Vapar_0858 details

Gene Information

• Locus tag: Vapar_0858
• ID: 7972073
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 945723
• End bp: 946463
• Gene Length: 741 bp
• Protein Length: 246 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 644791456
• Product: putative transmembrane protein
• Protein accession: YP_002942777
• Protein GI: 239813867

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAGCCTGG CGGCGGTCGA CTGGGCGCAG CCCTGGCTCG CGCCTTACCG CGCCATCGGC 
CAGGCGGCGG CGCAGGCGGC GCTCCACAGC CCGGTCGCAG CCGCGCTGCA GCGGCAAGCG 
GCGCCCGATT CCAGGCCCGC CTTCGTGCCG CAGTCGGCGC TGCCCGCGGG GCAGGCCTAT 
GAAGCCCACA TCTTCCAGAC CGGCACCGTG CCGACGCGCG ACAACCTGCA CGACTTCTTC 
AACGGCCTCG TCTGGCTCGC CTTTCCGGAG GCCAAGCGCC GCCTCAATGA ACTGCAGGCC 
GCCGAGATCG CCCGCGCGGG CATCGGTGCC ACGCGCGGCC CGTTGCGCGA CGCGCTCACG 
CTGTTCGACG AGAACGGCGC CGTGCTCGAT GCGCCCGGGC CGCTGTGGCG GGCGCTCGCC 
GCGCGCGACT GGCACACGCT CTTCGTGACG CAGCGCGCGC TGTGGTCCGG GGCGCGCCTC 
TGGGTGTTCG GCCATGCGCT GCTCGAGAAA CTCGCCGCGC CGCGCAAGGC GCTCACCGCG 
CATGTGCTGC GGCTGCCGGC ACCGGCTGCG GGCGGTTCGG CGGCGTCCTG CGACGGGGCG 
CTGGCGCGCA GCCTCGCGCC GGATCACCTG GCGCAAAAGC CCTTTGTTCC GCTGCCCGTG 
CTCGGCGTGC CGGGCTGGTG GGCCGGCAAC GCGGCGGCGA ATTTCTACGA CGATCCCAAG 
GTCTTCAGGC CCGGTCCGTA G 

 

Protein sequence

MSLAAVDWAQ PWLAPYRAIG QAAAQAALHS PVAAALQRQA APDSRPAFVP QSALPAGQAY 
EAHIFQTGTV PTRDNLHDFF NGLVWLAFPE AKRRLNELQA AEIARAGIGA TRGPLRDALT 
LFDENGAVLD APGPLWRALA ARDWHTLFVT QRALWSGARL WVFGHALLEK LAAPRKALTA 
HVLRLPAPAA GGSAASCDGA LARSLAPDHL AQKPFVPLPV LGVPGWWAGN AAANFYDDPK 
VFRPGP