| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0855 |
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| Symbol | |
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| ID | 7972070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 942868 |
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| End bp | 943686 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644791453 |
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| Product | protein of unknown function DUF88 |
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| Protein accession | YP_002942774 |
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| Protein GI | 239813864 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1432] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCGG TCGGCACGCC GGCAAGCACC TCGGCCAAGA GCATGGCCGT TTTCATCGAC
GCGGACAACT TGAACGATGC CACTGCGCTC GACCATGTGT TGTTGGCGTT GCGATCGATG
GCCGACCGCA TTCTTTACCG GCGTGCCTAC GGCCGGCCCG AGAGTCTCAA GAGCATCCAC
GCCGTCCTTT GGAGGCACGG GGTTCGGCCT GTCGCCAACC TTATCGTCGA CAAAACGACG
ACCGACAGTG CGTTGGTGAT CGACGCTGTA GAAGCGGTGT GTACCAATGA CATAGACATC
GTCGCCATCT GCTCGGGCGA CGCGGATTTC GTCCCGCTAG CCATCTGGTT GCGTGAGAAG
GGCTGTAGGG TTCTTTGCTA CAGCCTTGCC AACAAGATAT TCGCCAATCC CGACAGCTTC
TATGACGATG TGGTGCTGCT GGACGTGGTG GAAGCGGTAG ATTTCGTCGA GATAGCTCCT
CAATCCCAGA TCGCGCGCGG CAGCGCGGCG GCTACAGACG TTGAGTCTGC TAAGGAGCCA
GCGTCAACCG TCAAGTCTCA GCCGATAGCG GCGAAGGCAG GAGGCGTGCC GGTGGTCAAA
GCTGCTGTCG TGTCGGGGCC TTCCATCAAA AAGATTCTCT CGATCCTGCC TGAGCTCAAG
AGCAAGGAAC CCGTGCACTT GAGCTTGATC GCCAAGAAGC TGCGTGATGC TGGCCTGCTC
ACAGCGACCG CGAAGCCGGT TTTGCTATTC CGGCGCCATC CTGCGCAGTT CGAGTTGATG
CCGGAGCGCC AACCGAATAC GGTCAGATAT CGGGGCTGA
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| Protein sequence | MNAVGTPAST SAKSMAVFID ADNLNDATAL DHVLLALRSM ADRILYRRAY GRPESLKSIH
AVLWRHGVRP VANLIVDKTT TDSALVIDAV EAVCTNDIDI VAICSGDADF VPLAIWLREK
GCRVLCYSLA NKIFANPDSF YDDVVLLDVV EAVDFVEIAP QSQIARGSAA ATDVESAKEP
ASTVKSQPIA AKAGGVPVVK AAVVSGPSIK KILSILPELK SKEPVHLSLI AKKLRDAGLL
TATAKPVLLF RRHPAQFELM PERQPNTVRY RG
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