| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0851 |
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| Symbol | |
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| ID | 7972066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 938208 |
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| End bp | 939125 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791449 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002942770 |
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| Protein GI | 239813860 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCAC TGCCCCTCCC CTCTTCTTCT TCCTCCGCCG CCGCCGCCGA CGTGAAGCCG
CTGCCGCCGA TGCAACGCTC CCGCGGCTAC TGGACCTCGG CACTGCTGCG CTTCACGCGC
GATCCGGTCG CCATTGGTGC CGCCTTGGTG GTTCTGCTCC TGATCGGCCT GGCCGTGTTC
GGCCCGTGGC TCGCGCCGGC CGATCCTTAT GCCTCGTCGA TGCTCAAGCG GCTCAAGCCG
ATCGGCACCG AGGGCCTGCC GCTGGGCAGC GACGAACTGG GCCGCGACAT GCTGTCGCGC
CTGATCGTCG GCGCGCGGCT GTCGCTGTTC ATCGGCATCA CGCCGGTGAT CTGCGCCTTC
GTGCTCGGCA CAGTGATCGG CATCGTTGCG GGCTATGCGG GCGGTTTTAC CAACACGCTG
ATCATGCGCA CCATCGACGT GTTCTACGCC TTTCCCTCGG TGCTGCTGGC CATTGCGCTG
TCGGGCACGC TGGGCGCGGG CGTGGTCAAT TCGCTGATCT CGCTGACCAT CGTGTTCATT
CCGCAGATCG CGCGCGTGGC CGAGAGCGTG ACGACGCAGG TGCGCACGCG CGACTACGTG
GAGGCGGCGC GCGCCTCGGG CGCGAACCCG TTCACGATCG TGCGGGTGCA TGTGCTGGGC
AATGTGCTCG GCCCGATCTT CGTGTACGCG ACGAGCCTGA TCGCAGTGTC GATGATCCTG
GCCTCGGGCC TGTCGTTCCT GGGCCTGGGC GTGAAGCCGC CGGAGCCGGA GTGGGGCCTG
ATGCTCAACA CGCTGCGCAC CGCGATCTAT GTGCAGCCGT GGGTCGCCGC GTTGCCGGGC
GCGATGATCT TCATCACGTC GATCTCCTTC AATCTTCTGT CCGATGGGTT GCGGTCGGCG
ATGGACAACA AGGGGTGA
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| Protein sequence | MSALPLPSSS SSAAAADVKP LPPMQRSRGY WTSALLRFTR DPVAIGAALV VLLLIGLAVF
GPWLAPADPY ASSMLKRLKP IGTEGLPLGS DELGRDMLSR LIVGARLSLF IGITPVICAF
VLGTVIGIVA GYAGGFTNTL IMRTIDVFYA FPSVLLAIAL SGTLGAGVVN SLISLTIVFI
PQIARVAESV TTQVRTRDYV EAARASGANP FTIVRVHVLG NVLGPIFVYA TSLIAVSMIL
ASGLSFLGLG VKPPEPEWGL MLNTLRTAIY VQPWVAALPG AMIFITSISF NLLSDGLRSA
MDNKG
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