| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0850 |
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| Symbol | |
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| ID | 7972065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 936913 |
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| End bp | 937950 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644791448 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_002942769 |
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| Protein GI | 239813859 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGCAC TGAAAGACAT CGGCGGCCCC GCACAACCGC TGCTCACCAT CACAGGACTC
GTCAAGCACT TTCCGCTCAA GAAAGATCCG CTGGGCCGCG GCGGTGGCGT GGTGCGCGCG
GTCGACGGGG TCGACTTCGA AGTGCTCAAG GGCGAAACAC TCGGCGTGGT CGGCGAATCG
GGCTGCGGCA AGTCGACCAC CGCGCGGCTG CTGATGCAGC TGATTGCACC AACCCGGGGC
GAAGTGATCT TCGACGGCCG CGAGGTCGGC GGCCGCGAAC TGCCGCTCAA GGAGTTCAGG
CGCCAGGTGC AGATGGTGTT CCAGGACAGC TATGCCTCGC TCAACCCGCG CCTCACCATC
GAGGACTCGG TCGCCTTCGG CCCGCAGGTG CACGGCGTCG GGCGGCGCGA GGCCGTGGCG
CGTGCGCGCG ACCTGCTCGC GCGCGTCGGG CTCGAGCCGC AGCGCTTTGC CGAACGGTAT
CCGCATGAAC TGTCGGGCGG CCAGCGCCAG CGCGTCAACA TCGCGCGCGC GCTCGCGCTG
CAGCCGCGCA TGGTGATCCT CGACGAGGCC GTGTCGGCGC TCGACAAGTC GGTGGAGGCG
CAGGTCATCA ACCTGCTGCT CGACCTCAAG GCCGAGTTCG GCCTGACCTA TCTTTTCATC
AGCCACGACC TCAACGTGGT GCGCTACGTG AGCGACCGCG TGATGGTCAT GTACCTGGGC
CAGGTGGCCG AGATCGGGCC CGCCGACGCG CTCTACGATG CGCCGGCGCA TCCCTACACC
CGCGCGCTGC TCTCGTCGAT GCCCTCGATG GACCCCGACC ACCGCACCGA GCAAGCGGCA
CTGGCCGGCG ACCCGCCGAA CCCGATCAAC CCGCCCACGG GCTGCCGCTT CCATCCGCGC
TGCGCGCTGG CTGCGCCCGT GTGCAGCCGG GTGGTGCCCG AGCCCATCGC CACCGGCGCG
CGGCATGCGG CGAGCTGCCT GGTCCACGAG GCCGGCAGCG GACATCCGAT GGCCGTGCCG
CTGGCCAGGG CGGCGTGA
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| Protein sequence | MDALKDIGGP AQPLLTITGL VKHFPLKKDP LGRGGGVVRA VDGVDFEVLK GETLGVVGES
GCGKSTTARL LMQLIAPTRG EVIFDGREVG GRELPLKEFR RQVQMVFQDS YASLNPRLTI
EDSVAFGPQV HGVGRREAVA RARDLLARVG LEPQRFAERY PHELSGGQRQ RVNIARALAL
QPRMVILDEA VSALDKSVEA QVINLLLDLK AEFGLTYLFI SHDLNVVRYV SDRVMVMYLG
QVAEIGPADA LYDAPAHPYT RALLSSMPSM DPDHRTEQAA LAGDPPNPIN PPTGCRFHPR
CALAAPVCSR VVPEPIATGA RHAASCLVHE AGSGHPMAVP LARAA
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