| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0849 |
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| Symbol | |
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| ID | 7972064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 935868 |
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| End bp | 936908 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644791447 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_002942768 |
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| Protein GI | 239813858 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACCA CGATGAACAA CCCCAGCTCT TCTTTCTCCT CCGAGCCGAT GGTCCGCCTG
CGCGACCTCA GTGTCACGTT CAGCGGCGGC CGCAAGCCCG TGCATGCGGT GAGCGGCGTG
AGCCTGGAGG TGCAGCGCGG CGAGGTGGTC GCGCTGATCG GCGAATCGGG CTCCGGCAAG
AGCGTGACGC TGCGCACGCT GCTGCGCCTG CATCCCGAGC GCCGCACGCG CATCGGCGGG
CAGGTGCAGG TGGCCGGGCG CGACGTGCTC GCGATGCCCG CGCGCGAGCT CGACGACTTC
CGCGGCAAGG TCGCCTCGAT GATCTTCCAG GAGCCGCTGC TCGCGCTCGA TCCGGTGTAT
TCGGTCGGCG CGCAGATCGT CGAGTCGATC CGCCGGCACG ACAGGAAGGC CACGGCGGCC
GAGGCGCAGC AGCGTGCGCT TGCGCTGTTC GAACGCGTGC GCATCCCGAG CCCCGAGCGG
CGCCTGGCGG CCTATCCGCA CGAGATGTCG GGCGGCATGC GGCAGCGCGC GATGATCGCG
CTGGCGCTGG CATGCAAACC CCAGCTGCTG CTGGCCGACG AGCCGACCAC CGCGCTCGAC
GCCACGGTGC AGATCCAGAT CCTTTTGCTG CTGCGCGAAC TGCAGCGCGA CCTCGGCCTG
TCGGTGATCT TCGTCACGCA CGACATCGGC GCCGCGGTCG AGGTGGCCGA CCGCATCGCC
GTGATGTATG CGGGCCGCAT CGTCGAGGAA GGCACGGCGC GCGAGCTGAT CCGCTCGCCG
CGCCACCCCT ACACCATCGC GCTGCTCAAG AGCCGCGCGC ACGGCGCTCT GGCGCGCGGC
GCACGGCTGG AGACCATCGG CGGCACGCCG CCCGACCTGT CGGCGCTGCC GCCCGGCTGC
GCCTTTGCCG AACGCTGCAC GCTCGCCACC GATGCCTGCC GCGCCGCGCA GCCGCCGGTG
GTCGAGCTTG CGCCGAACCA CCGCGCGCGC TGCATTCATA CCGATGCCGC CGTCGCCATC
GCACCCACGC TGGTCGCCTG A
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| Protein sequence | MTTTMNNPSS SFSSEPMVRL RDLSVTFSGG RKPVHAVSGV SLEVQRGEVV ALIGESGSGK
SVTLRTLLRL HPERRTRIGG QVQVAGRDVL AMPARELDDF RGKVASMIFQ EPLLALDPVY
SVGAQIVESI RRHDRKATAA EAQQRALALF ERVRIPSPER RLAAYPHEMS GGMRQRAMIA
LALACKPQLL LADEPTTALD ATVQIQILLL LRELQRDLGL SVIFVTHDIG AAVEVADRIA
VMYAGRIVEE GTARELIRSP RHPYTIALLK SRAHGALARG ARLETIGGTP PDLSALPPGC
AFAERCTLAT DACRAAQPPV VELAPNHRAR CIHTDAAVAI APTLVA
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