| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0848 |
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| Symbol | |
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| ID | 7972063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 934652 |
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| End bp | 935833 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644791446 |
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| Product | amidase |
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| Protein accession | YP_002942767 |
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| Protein GI | 239813857 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCTGC ACGACCCCGC CCACGCCTTC GTTCCGTACC CCGACGCGCC GGTGCCGCAT
GCGCCCACCG GCCCGCTGGC CGACCTGCGC TTTGCAGCCA AGGACCTGTT CGACGTGGCC
GGCTATCCCA CCGGCGGCGG CAGCCCGATC GTGCTTGCGA TGTCGGGCAT CAAGACCCGC
ACCGCGCCCA CCGTGCAGAA GCTGCTCGAT GCGGGCGCGC GCTTCGCGGG CAAGACCGTG
ACCGACGAAC TCGCGTTCTC GATGAACGGC AACAACGCGC ACTTCGGGGC GCCGATCAAC
GGCGCCGCAA AAGACCGCAT CACCGGCGGC TCGTCGTCGG GCTCGGCCTC GGCCGTGTCA
TCGGGCCTGT GCGACTTTGC GCTCGGCACC GACACCGGCG GCTCGGTGCG CGCGCCGGCC
AACCACTGCG GCCTGTACGG CCTGCGCCCC ACGCACGGCC GCGTGAGCCT CGAAGGCGCG
CTCGACCTTG CGCCCAGCCT CGACACCTGC GGCTGGTTCG CACGCGACAT CGGCACCTTT
GCGCGCGTGG CCGACGTGCT GCTGGATGCC GACACGGCCG CGCTGCCCGC GCGCGTGCGG
CTGCTGCGGC CCGAGGACGT GTGGTCGCTC GCGGTGCCGG CCGCGGCCGA CGCGCTGGCG
GATGCGGCCG CGCGCGCGCA GCGCGTGCTC GGCGATGCGG CGGGCATCGA GGTCGCGCTC
GACTCCTTCG ACGCGATGTA CTGGAACTTC CGCTACGTGC AGTCGCACGA GGCCTGGCTC
ACCGACGGCC CGCTGATCGA GCGCTACGCG CCGCCGCTGG GCCCGGGCGT GGCCGAGCGC
TTTGCCTGGT CGCGCGGCGT AACCGATGCG CAGATCGCCG CCGGCCGCGC CTTCCGCACC
AGCTTCCGCA GCCACCTGGC CAAGCTGCTC GGCAGCGACG GCGTGCTGCT GATGCCGACC
ATGCCCGACA TCGCGCCGCT GCGCAGCGAA GGCGAGGCCG GCCTGGAGGA CTACCGCAAC
CGCGCGATCC GGATGCTGTG CATTGCGGGC CTTGCCGGCT TTCCGCAATT GTCGATGCCG
CTCGCGCAGC GCCACGGTGC GCCGCTGGGC ATTTCGCTGC TCGGACCGGC GGGGTCGGAC
CGGTCGTTGA TCGGGCTGGC GGAGCGCATT GCCGGCGGCT GA
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| Protein sequence | MPLHDPAHAF VPYPDAPVPH APTGPLADLR FAAKDLFDVA GYPTGGGSPI VLAMSGIKTR
TAPTVQKLLD AGARFAGKTV TDELAFSMNG NNAHFGAPIN GAAKDRITGG SSSGSASAVS
SGLCDFALGT DTGGSVRAPA NHCGLYGLRP THGRVSLEGA LDLAPSLDTC GWFARDIGTF
ARVADVLLDA DTAALPARVR LLRPEDVWSL AVPAAADALA DAAARAQRVL GDAAGIEVAL
DSFDAMYWNF RYVQSHEAWL TDGPLIERYA PPLGPGVAER FAWSRGVTDA QIAAGRAFRT
SFRSHLAKLL GSDGVLLMPT MPDIAPLRSE GEAGLEDYRN RAIRMLCIAG LAGFPQLSMP
LAQRHGAPLG ISLLGPAGSD RSLIGLAERI AGG
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