Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0846 |
Symbol | |
ID | 7972061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 933691 |
End bp | 934212 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644791444 |
Product | Ureidoglycolate hydrolase |
Protein accession | YP_002942765 |
Protein GI | 239813855 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG3194] Ureidoglycolate hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGATG CAGCTTTCCT CGCCCCGATG CCGCTCGCGG TGCAACCGCT GACACCCCAG GCTTTCGCGC CCTACGGCAC GGTGCTGGCC GCGCCCGCCG GCAAGAAGGG CCGCCCGATC AATGGCGGCA ATGCCGAACG CTTCGACCTT GTCGGCGACC TGCAGCTCGG CGCGCAGGGC GGCCGGCCGA TGCTCGCGCT GTTTCGCGCG CAGGCGCGGC GTTTTCCGCA TGAAGTCACG GAGATGGAGC GCCACGCGCT CGGCAGCCAG ACTTTCGTGC CCTTGGGAGA AAGGCGCTTC GTCATCGTCG TGGCGCCGGC CGGCGAGGCG CCCGCGCCCG CTGCGCTCGC TGCGTTCGTG ACCGACGGGC TGCAGGGCGT GACACTCGCG CCCGGCACCT GGCACCACGC GCTGCTGGCG GTGGATGCGG GCGACTTCGT GGTGGTGGAG CGGGCCGCGG CGAGTGTCGA TTGCGATACC TGCGCGCTGG CGGCGCGGGT GGTCGTCGAT TGGCGCGACT AA
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Protein sequence | MNDAAFLAPM PLAVQPLTPQ AFAPYGTVLA APAGKKGRPI NGGNAERFDL VGDLQLGAQG GRPMLALFRA QARRFPHEVT EMERHALGSQ TFVPLGERRF VIVVAPAGEA PAPAALAAFV TDGLQGVTLA PGTWHHALLA VDAGDFVVVE RAAASVDCDT CALAARVVVD WRD
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