| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0831 |
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| Symbol | |
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| ID | 7972046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 915337 |
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| End bp | 916086 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644791429 |
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| Product | ABC transporter related |
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| Protein accession | YP_002942750 |
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| Protein GI | 239813840 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGAAA AAATGATTGA AATCAAGAAC GTCTCGAAGT GGTATGGCCC GGTGCAGGTG
CTCAACGATT GTTCGGTGAG CATCTCCAAG GGCGACGTGG TGGTGGTGTG CGGGCCTTCG
GGCTCGGGCA AGTCCACCCT CATCAAGACC GTGAACGCGC TCGAGCCCTT CCAGAAGGGC
GAGATCACCG TCAACGGCAT CCCGCTGCAC GACCCCAAGA CCAACCTGCC GAAGCTGCGC
TCCAAGGTCG GCATGGTGTT CCAGCACTTC GAACTGTTCC CGCACCTGTC GGTCACCGAG
AACCTCACGA TCGCGCAGAT CAAGGTGCTG GGCCGCAGCC CCGACGAGGC CAAGACCCGC
GGCCTCAAGA TGCTCGACCG CGTGGGCCTG ATGGCGCACA AGGACAAGTT CCCGGGCCAG
CTCTCGGGCG GCCAGCAGCA GCGCGTGGCC ATTGCCCGCG CGCTCAGCAT GGACCCGATC
GTGATGCTGT TCGACGAGCC CACCTCGGCG CTCGACCCCG AAATGGTCGG CGAAGTGCTC
GACGTGATGG TGAGCCTGGC CAAGGACGGC ATGACCATGA TGGTGGTCAC GCACGAAATG
GCCTTTGCGC GCAAGGTGGC GAGCCGCGTG ATCTTCATCG ACGTGGGCGG CAAGATTTTG
GAAGACTGCC CGAAGGACGA GTTCTTCAGC CACCCGGAAA ACCGCCAGCC GCGCACCAAG
GATTTCTTGA ACAAAATTCT GCAGCACTGA
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| Protein sequence | MSEKMIEIKN VSKWYGPVQV LNDCSVSISK GDVVVVCGPS GSGKSTLIKT VNALEPFQKG
EITVNGIPLH DPKTNLPKLR SKVGMVFQHF ELFPHLSVTE NLTIAQIKVL GRSPDEAKTR
GLKMLDRVGL MAHKDKFPGQ LSGGQQQRVA IARALSMDPI VMLFDEPTSA LDPEMVGEVL
DVMVSLAKDG MTMMVVTHEM AFARKVASRV IFIDVGGKIL EDCPKDEFFS HPENRQPRTK
DFLNKILQH
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