| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0827 |
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| Symbol | |
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| ID | 7972042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 911236 |
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| End bp | 912687 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791425 |
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| Product | fumarate lyase |
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| Protein accession | YP_002942746 |
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| Protein GI | 239813836 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1027] Aspartate ammonia-lyase |
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| TIGRFAM ID | [TIGR00839] aspartate ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCCGA ATTTCAGGAC CGAACACGAC TTTCTCGGCG AAAAGCAGAT TCCTGCCTTT
GCCTACTGGG GCGTGCACAC GGCGCGCGCG GTCGAGAACT TCGCCATCTC CGGCACCCGC
GTGTCGGCCA TGCCCGACCT GGTGCGCGCG CTGGCCTTCG TGAAAAAGGC CGCCACCCGC
GCCAATGCCG ATCTCGGCGC CATCGACCGC GACCGCGCGG CCGCCATCAT CCTGGCCTGC
GAGGACCTGA TCGAAGGCAA ATTGCTCGAC GAATTCGTGG TCGACGTGAT CCAGGGCGGC
GCCGGCACCT CGACCAACAT GAACGCCAAC GAGGTGATCT GCAACCTCGC GCTCGAGAAG
CTCGGCCACG AAAAGGGCCG CTACGACGTG CTGCATCCCA ACGACCACGT CAACGCCTCG
CAAAGCACCA ACGACGTCTA TCCGACGGCG GTGCGGCTGG CGCTGTGGTT TGCCATCGGC
CGGCTGCTCG AATCCATGGC GGCGCTGCGC AAGAGCTTCG AAGCCAAGGC GCTCGAATTC
AAGGACATCC TGAAGATCGG CCGCACCCAG CTGCAGGACG CCGTGCCCAT GACGCTGGGC
CAGGAGTTCC TGACCTACGC CGTCATGATC GGCGAGGACG AGGCCCGCCT GGGCGAGGCG
CGCGCGCTCA TCGAGGAAAT CAACCTCGGC GCCACCGCCA TCGGCACCGG CATCAACGCG
CCGCACGGCT ATGCCAACCT GGCCTGCCAG TACCTGGCCG AGCAGACCGG CGTGCCGCTC
AAGCAGTCGG CCAACCTGAT CGAGGCCACG CAGGACACCG GCGCCTTCGT GCAGCTGTCG
GGCGTGCTCA AGCGCGTGGC CACCAAGCTC AGCAAGACCT GCAACGACCT GCGCCTGCTC
TCCAGCGGCC CGCAGGCGGG TTTCGGCGAG ATCCGGCTGC CGGCGCGCCA GGCCGGCTCG
TCGATCATGC CGGGCAAGGT GAACCCGGTG ATCCCGGAAG TGATGAACCA GGTGGCCTTC
GAGGTCATCG GCAACGACAT CACCGTGACC ATGGCGTCCG AGGCCGGCCA GCTGCAGCTC
AACGCCTTCG AGCCGATCAT GGGATGGAGC CTGTTCAAGA GCATCAAGCA CCTGAGCAAC
GCCTGCAACA CGCTGCAGCT CAACTGCGTC GAAGGCATCG AGGCGAACCG GGAGTTCCTG
GCCAAGCGGG TGCGCGAATC GGTCACGCTG GTCACCGCGC TGAATCCGCT GATCGGCTAC
GAGAAGGCGG CGCTGATCGC CAAGACCGCG CTGGCCACCG GCGGGCCCAT CGACCTGGTG
GCCGAATCGC TCGGCATCAT GACGCGCGCC GAGATGGAGG CGCTGCTCGT GCCCGAGAAC
CTGACCCAGC CGGTGCGCCT GTCCGCGCCG GTGCCGCCGG CTGCCGAGCC CTCGGGCACA
AAGGCTGCTT AG
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| Protein sequence | MSPNFRTEHD FLGEKQIPAF AYWGVHTARA VENFAISGTR VSAMPDLVRA LAFVKKAATR
ANADLGAIDR DRAAAIILAC EDLIEGKLLD EFVVDVIQGG AGTSTNMNAN EVICNLALEK
LGHEKGRYDV LHPNDHVNAS QSTNDVYPTA VRLALWFAIG RLLESMAALR KSFEAKALEF
KDILKIGRTQ LQDAVPMTLG QEFLTYAVMI GEDEARLGEA RALIEEINLG ATAIGTGINA
PHGYANLACQ YLAEQTGVPL KQSANLIEAT QDTGAFVQLS GVLKRVATKL SKTCNDLRLL
SSGPQAGFGE IRLPARQAGS SIMPGKVNPV IPEVMNQVAF EVIGNDITVT MASEAGQLQL
NAFEPIMGWS LFKSIKHLSN ACNTLQLNCV EGIEANREFL AKRVRESVTL VTALNPLIGY
EKAALIAKTA LATGGPIDLV AESLGIMTRA EMEALLVPEN LTQPVRLSAP VPPAAEPSGT
KAA
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