| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0826 |
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| Symbol | |
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| ID | 7972041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 910052 |
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| End bp | 911041 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644791424 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002942745 |
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| Protein GI | 239813835 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAACAA AGTGGCTCGA AGACTTCATC AGCTTGGCGG AAACGCGCAG CTTCAGCCGC
TCGGCCCAGT TGAGGCACGT GACCCAGCCC GCGTTCTCGC GCCGCATCCA GGCGCTCGAG
GGCTGGGCCG GCACCGACCT GGTGGACCGC AGTTCCTACC CGACGCGCCT CACGCCCGCG
GGCCAGACGC TCTATAGCCA GGCCATCGAG ATGCTGCAGT CGCTGCAGAG CACCCGCGCC
ATGCTGCGCG GCCACTCGGC CGCCGGGCAG GACGTGATCG AGATCGCGGT GCCGCACACG
CTGGCCTTCA CCTTCTTTCC CTCCTGGGTG ACCAGCCTGC GCGAGCACTT CGGCCCCATC
AAGAGCCGGC TGATCGCGCT CAATGTGCAC GACGCCGTGC TGCGCCTGGT CGAGGGCAGC
TGCGACCTGC TGATCGCCTA CCACCATCCG TCCCAGCCGC TGCAGCTGGA TGCCAACAAG
TACGAGATGG TCAGCCTGGG CGAGGAAACC GTGGCGCCCT GGGTCAAGGC CGACGCCGAC
GGCGCGCCGC GCTTCCGGCT GCCCGGCCGG CCGGGCCAAC CGCTGCCCTA CCTGGGCTAT
GCGCCCGGCG CCTACCTGGG GCGCGTGGTC GACCAGCTGC TGAAGGAGTC GGGCACCGCC
ATCCACCTCG ACCGGGTCTA TGAAACCGAC ATGGCCGAAG GCCTCAAGGT CATGGCGCTC
GAAGGCCACG GCATCGCCTT TTTGCCGCAG AGCGCGGTGC GCAAGGAAAT CAAGGCGCGC
AAGCTCGTGA GCGCGCTGCC GCCCGAGATC GACAGCCTGG AGGCGACGAT GGAGATCCGC
GCCTACCGCG AGCGGCCGAG CGCGCCGGCG CCGGTGAAGG CCGGCAGCGG CCGCGCCGCC
AAGGTGCCGG TGTCCGAAGG CCTGCAGCCC AAGCGCACGG CCGATGCGCT GTGGTCGTAC
CTGGTCGGTG CCCAGCCGCC GGGCCGCTGA
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| Protein sequence | METKWLEDFI SLAETRSFSR SAQLRHVTQP AFSRRIQALE GWAGTDLVDR SSYPTRLTPA
GQTLYSQAIE MLQSLQSTRA MLRGHSAAGQ DVIEIAVPHT LAFTFFPSWV TSLREHFGPI
KSRLIALNVH DAVLRLVEGS CDLLIAYHHP SQPLQLDANK YEMVSLGEET VAPWVKADAD
GAPRFRLPGR PGQPLPYLGY APGAYLGRVV DQLLKESGTA IHLDRVYETD MAEGLKVMAL
EGHGIAFLPQ SAVRKEIKAR KLVSALPPEI DSLEATMEIR AYRERPSAPA PVKAGSGRAA
KVPVSEGLQP KRTADALWSY LVGAQPPGR
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