| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0821 |
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| Symbol | |
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| ID | 7972036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 904004 |
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| End bp | 905110 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644791419 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_002942740 |
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| Protein GI | 239813830 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGGCCGC TGCGCATCGG CATCATCGGT TCCTGGTCGG GCCCTTATGC GGCGGGCGGG
CGCCAGTTCG ATGCCGGCAT GTCGGTCTGG CTCGCGGCCC ACAACCAGCG CATCGCGGGA
CGCCCGGTCG AACTGCTGCG CCGCGACGTG CCCGGCAGCG CGCCCGAGCA GGCGCGGCGC
CATGCGCAGG ACCTGGTGGA GAGCGAGCGT GTCGACCTGC TCGCGGGGCT GGACTTCAGC
TCCAACGCCT ACGCCGTCGG CGCCGTGGCC ACGCAGGCCA AGGTGCCGCT GCTGGTGATG
AATGCGGCTT CCTCGGGCAT CACGGCGCGC TGCCCGTTCG CGGTGCGCGT GTCCTTCACC
ATCGCGCAGG TCACGATGCC GCTGGCGCGC TGGGCGATCC AGCAAGGGCT GCGCGATGTC
TGCACCGTGG TGGCCGACTA TGCCTCGGGC GTCGATGCCG AAAGCGCCTT CGTCTCGGCC
GTCACCGCCG GCGGCGGCCG CATCGGCGCG ATGCTGCGCG TGCCGCTCAA CACCCTGGAC
TATTCGGCCT ACATGCTGCG GCTGCGCGAG CTCAGGCCGC AGGCGGTGTT CTTCTTCCTG
CCTTCGGGCC AGATGCCCGC CACCTTCCTC AAGTTCTGGC GCGACCGCGG CATGGCCGAC
ACCGGCATCC GCCTGCTCGC GACCGGCGAC GCCACCGACG ACCACTACCT CGAAGGCATC
GGCGAGCTGG CCGAGGGCCT CGTGACCAGC CACCACTATT CGTTTGCCCA CGAATCGGCG
GCCAACCGCC GCTTCACGGC CGCCTTCGAG ACCGAGTACG GCAGCCACCT GCGGCCCGGC
TATTTCGCGG TGGCGGCGCA CGATGCGCTC GCGGCGGCCG ATGCCGCGAT GAGCTCGCCG
GCCGCGCGCG GCGGCCTGAA TGGCGAACGG CTGGTGGACG CTTTCCGGGG CCTCCAGCTC
GAGAGCCCGC GCGGCCCGAT CGAGATCGAC GCCCACACGC GCGACATCGT GCAGGCCGTC
TACATCCGCC GCACTGAAAG GCTCGACGGG CGCTGGATCA ACCGCGAGTT CGAACGCTTC
GAACGGGTGC GCGAGCCGGC GCTGTGA
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| Protein sequence | MRPLRIGIIG SWSGPYAAGG RQFDAGMSVW LAAHNQRIAG RPVELLRRDV PGSAPEQARR
HAQDLVESER VDLLAGLDFS SNAYAVGAVA TQAKVPLLVM NAASSGITAR CPFAVRVSFT
IAQVTMPLAR WAIQQGLRDV CTVVADYASG VDAESAFVSA VTAGGGRIGA MLRVPLNTLD
YSAYMLRLRE LRPQAVFFFL PSGQMPATFL KFWRDRGMAD TGIRLLATGD ATDDHYLEGI
GELAEGLVTS HHYSFAHESA ANRRFTAAFE TEYGSHLRPG YFAVAAHDAL AAADAAMSSP
AARGGLNGER LVDAFRGLQL ESPRGPIEID AHTRDIVQAV YIRRTERLDG RWINREFERF
ERVREPAL
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