Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0820 |
Symbol | |
ID | 7972035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 903044 |
End bp | 903808 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644791418 |
Product | enoyl-CoA hydratase |
Protein accession | YP_002942739 |
Protein GI | 239813829 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGACA TCCTCGTCCA CACCGAAGCC GGTGTGATGA CCCTCACCTT CAACCGCGTC GACAAGAAGA ACTCCATCAC CGGCAGCATG TACGGCGAGC TCGCCGATGC ACTGGCCGCG GCCGAGGGCG ATGCGGCCGT GCGCTGCGTG CTGATCCAGG GCGACCCCAC CATCTTCAGC GCGGGCAACG ACATCGGCGA CTTCCTCAAC GCGCCGCCGG CCGGCAAGGA TTCGCCGGTG TTCCGCTTTT TGCGCGGCAT CGCGGCCTTT CCCAAGCCCA TCGTGGCGGC GGTCTGCGGC CCGGCCGTGG GCATCGGCAC CACGATGCTG TTCCACTGCG ACCTGGTCTA CGCGGGCGAC AACGCAGCGT TCTCGATGCC CTTCGTGAAC CTGGGCCTGT GCCCCGAGGC GGCGTCGAGC CTGCTGGTGC CGCAGATGCT GGGCTACCAC CGCGCGGCCG AGGCGCTGCT GCTGGGCGAG CCCTTCATGG CCGAGGCCGC GCTCGAAGTC GGCCTGGTCA ACCGCATCGT GCCGCCGACC GAAGCCAATG CCATCGCGCA GGTGCAGGCC CGCAAGCTCG CGGCCAAGCC GCTGAGCGCG CTGGTCGAGA CCAAGCGCCT GCTGAAGAAG GCGCAGATGC CGGCCGTGCT CGAACGCATG GACGAAGAAG GCGCGAGCTT CGGCCGCATG CTGCGCGAAC CCGCCGCGCG CGAGGCTTTC GGCGCCTTCA TGGAGAAGCG CAAGCCCGAT TTCTCCAAAG TCTGA
|
Protein sequence | MSDILVHTEA GVMTLTFNRV DKKNSITGSM YGELADALAA AEGDAAVRCV LIQGDPTIFS AGNDIGDFLN APPAGKDSPV FRFLRGIAAF PKPIVAAVCG PAVGIGTTML FHCDLVYAGD NAAFSMPFVN LGLCPEAASS LLVPQMLGYH RAAEALLLGE PFMAEAALEV GLVNRIVPPT EANAIAQVQA RKLAAKPLSA LVETKRLLKK AQMPAVLERM DEEGASFGRM LREPAAREAF GAFMEKRKPD FSKV
|
| |