Gene Vapar_0820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0820 
Symbol 
ID7972035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp903044 
End bp903808 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content68% 
IMG OID644791418 
Productenoyl-CoA hydratase 
Protein accessionYP_002942739 
Protein GI239813829 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACA TCCTCGTCCA CACCGAAGCC GGTGTGATGA CCCTCACCTT CAACCGCGTC 
GACAAGAAGA ACTCCATCAC CGGCAGCATG TACGGCGAGC TCGCCGATGC ACTGGCCGCG
GCCGAGGGCG ATGCGGCCGT GCGCTGCGTG CTGATCCAGG GCGACCCCAC CATCTTCAGC
GCGGGCAACG ACATCGGCGA CTTCCTCAAC GCGCCGCCGG CCGGCAAGGA TTCGCCGGTG
TTCCGCTTTT TGCGCGGCAT CGCGGCCTTT CCCAAGCCCA TCGTGGCGGC GGTCTGCGGC
CCGGCCGTGG GCATCGGCAC CACGATGCTG TTCCACTGCG ACCTGGTCTA CGCGGGCGAC
AACGCAGCGT TCTCGATGCC CTTCGTGAAC CTGGGCCTGT GCCCCGAGGC GGCGTCGAGC
CTGCTGGTGC CGCAGATGCT GGGCTACCAC CGCGCGGCCG AGGCGCTGCT GCTGGGCGAG
CCCTTCATGG CCGAGGCCGC GCTCGAAGTC GGCCTGGTCA ACCGCATCGT GCCGCCGACC
GAAGCCAATG CCATCGCGCA GGTGCAGGCC CGCAAGCTCG CGGCCAAGCC GCTGAGCGCG
CTGGTCGAGA CCAAGCGCCT GCTGAAGAAG GCGCAGATGC CGGCCGTGCT CGAACGCATG
GACGAAGAAG GCGCGAGCTT CGGCCGCATG CTGCGCGAAC CCGCCGCGCG CGAGGCTTTC
GGCGCCTTCA TGGAGAAGCG CAAGCCCGAT TTCTCCAAAG TCTGA
 
Protein sequence
MSDILVHTEA GVMTLTFNRV DKKNSITGSM YGELADALAA AEGDAAVRCV LIQGDPTIFS 
AGNDIGDFLN APPAGKDSPV FRFLRGIAAF PKPIVAAVCG PAVGIGTTML FHCDLVYAGD
NAAFSMPFVN LGLCPEAASS LLVPQMLGYH RAAEALLLGE PFMAEAALEV GLVNRIVPPT
EANAIAQVQA RKLAAKPLSA LVETKRLLKK AQMPAVLERM DEEGASFGRM LREPAAREAF
GAFMEKRKPD FSKV