Gene Vapar_0809 details

Gene Information

• Locus tag: Vapar_0809
• ID: 7971861
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 892419
• End bp: 893120
• Gene Length: 702 bp
• Protein Length: 233 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 644791407
• Product: transcriptional regulator, TetR family
• Protein accession: YP_002942728
• Protein GI: 239813818

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTGTCA ATGCCGTTCC CGCCAAGCCG GTCCGCGCTG CCCAGAAGGG CCAGCAGACC 
AAGGCCGTGA TCGTCGACGC CGCGCTGGCG CTGGCGGCGC AGATCGGGCT CGAGGGCCTG 
TCGATCGGCG CGGTGGCCGA GCTCACCAAG ATGAGCAAGT CGGGCGTGTT CGCCCACTTC 
GGCTCGCGCG AGGAACTGCA GATTTCCGTG GTGCGCGAGT ATCACGCACG TTTCGAGCAG 
GAAGTGTTTT TTCCCGCGCT CGAGGCGCCG CGCGGCCTGC CGCGCCTGCG CGCCATGTTC 
GCCAACTGGA TGAAGCGCAC CTCGGCCGAG ATCGACTCGG GCTGCATCTA CATCAGCGGC 
GCTTCCGAAT TCGACGACCG TCCCGGCCCG GTGCGCGATG CGCTGGTGGA GTCGGTCAGC 
ATCTGGCAGG CGGCCGTGCT GCGCGCGATC GTGCAGGCCA AGAGCGAAGG CCATCTGCGC 
GCCGATGCCG ACGAGCGGCA GCTGGCCTTC GAGATCCACG GCCTGATCCT CGCGCTGCAC 
TACGAAGCGC GCTTCCTGCA GGTGCCGGGC TCCATCGGCC GCGCGAACGT CGGCTTCGAC 
AACATCCTTG CGCGCAGCGC CACGCCCGAT GCGCCGCCCG CCGAAGCCGC GGCATCGGCG 
GCCAAGCCCG CGGCCTCCCG CCGGCTCAAG CCGGTGCGCT GA 

 

Protein sequence

MSVNAVPAKP VRAAQKGQQT KAVIVDAALA LAAQIGLEGL SIGAVAELTK MSKSGVFAHF 
GSREELQISV VREYHARFEQ EVFFPALEAP RGLPRLRAMF ANWMKRTSAE IDSGCIYISG 
ASEFDDRPGP VRDALVESVS IWQAAVLRAI VQAKSEGHLR ADADERQLAF EIHGLILALH 
YEARFLQVPG SIGRANVGFD NILARSATPD APPAEAAASA AKPAASRRLK PVR