| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0803 |
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| Symbol | |
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| ID | 7971855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 885563 |
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| End bp | 887617 |
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| Gene Length | 2055 bp |
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| Protein Length | 684 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644791401 |
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| Product | 5-oxoprolinase (ATP-hydrolyzing) |
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| Protein accession | YP_002942722 |
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| Protein GI | 239813812 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.148951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTCCA CAAGCAAATC CCTTGTTGTC GGCGTCGACG TCGGTGGCAC CTTCACCGAC
CTGTTCGTGC TCGACGAGGC CAACGGCAGC GCGCGCATCG TCAAGGTGCC CTCCACGCGC
GGCGAGGAAG CGCGCGGCTT CATGAACGGC GTGGCGCGCG TGGCCGATTC GGCCGCGGCC
ATCGCCACCA TCGTGCACGG CACCACCGTC GGCACCAACG CGCTGCTCGA ACGCAAGGTG
GCGCGCACCG GCATCATCAC CACGCGCGGC TTTCGCGACG TGCTCGAGAT GCGTCGCCGC
GACCGGCCCC AGACCTGGGG CCTGCGCGGC AGCTTCGTGC CCGTGGTGCC GCGCGACCTG
CGCCGCGAAG TCGACGAGCG CGTGCTGGCC GACGGCACGC TGCACACGCC GGTCGACCTG
GACCAGGTGC GCGCCGAAGC GCGCTCGCTG CTCGAGGCGG GCTGCGAAGC GGTGTGCGTG
TTCTTCATCA ACACCTACGC CAACCCCGAG AACGAACGGC TCGCCGTGGC GGCCGTGCGC
GAGCTCTGGC CCAACCCGCA CGTCACCTCG GCCAGCGAGG TGCTGCCCGA GATCCGCGAG
TTCGAGCGCT GCTCGACCGC CACGCTCAAT GCGGCGCTGC AGCCGGTGGT CGGCAGCTAC
CTCGGCCGCC TCGAAGCCGA CCTGCGCGCG CAGGGCTTCG CGGGCGAGCT GCTGGTGGTG
CAGAGCAACG GCGGCGTGAT GTCGCGCCAG ACCGCGAGCG ACCTGCCGGT GCGCACCGCG
CTCTCGGGCC CGGCGGCCGG CGTGATCGCC TGCGCGGCCA TTGCGCGCGC GGCGGGTTTC
CCGAACGTGA TCACCGGCGA CATGGGCGGC ACCTCGTTCG ACGTGTCGCT GGTGGCCAAC
GGCGAGGCCG CGCTGGCCGC GCAGACCGCC ATCGAGTTCG GCATGGTGAT CCGCTCGCCG
ATGATCCAGA TCGAGACCAT CGGCGCCGGT GGCGGCTCCA TCGCCTCCGT GGATGCGAGC
GGCATGCTGC AGGTCGGCCC GGAGTCGGCC GGCAGTGTGC CGGGGCCGGC GTGCTACGGA
CGCGGCAACA TGCGCCCGAC CGTGACGGAT GCGAACGTGC TGCTGGGCCG CATCGCCGCC
GACCGGCCGC TGGGCGGCGG GCTGCTCGCG GCATTGGACG CAGAGAAGTC GCGCCAGGCC
ATCGAAGAGC ACGTTGCGCG CCCGCTCGGT CTCGACGTGC ATGCGGCTGC GGAAGCCATT
CTCACGGTGG CCAATGCACG CATGGCGGGC GCGATCCGCC TCGTGTCGAT CGAGCGCGGG
CACGATCCGC GCCGCTTTGC CTACATGCCC TTCGGCGGCG GCGGTGCGCT GCATGTGTGC
GCGATGATGC GCGAGGTGGG CGTGGCCACC GGCATCGTGC CGCGCTATCC CGGCGTGACC
TCCGCCCTTG GCTGCGTGAT CGCCGACATG CGGCACGACG CGGTGCAGAC CCTCAACAGG
CCGCTCGCCG AACTCGACGT GGCCGACCTG CAGCGCCGCA TCGACGAACT CTCGGCGGCC
TGCCAGCAGC GCCTCGACTC CTCGGGCGTG CGCTTCGACG AAGTGCGCGA GGTGGTCGCG
CTCGACATGC TCTATGCGGG CCAGACGCAC ACGCTGCCCG TGGTGCTGGC CGATGCGGGC
CAGGCGCCGG TCACGGCCGC GTCGATCCGC ACCGCCTTCG AGGCCGCCTA CACGGCCGCC
TTCGGCCGCG TGCTCGACGG CATCCCCATC CGCGTGATGA ACCTGCGCTA TGCGCGCATC
GGCGTGCGGC CCAAGTTCGA CCTGAAGGTG CTGGCACCCG AAGGGCGGGG CAGCACCGCG
CCGCTGGGCA CGCAGCGCGT GTTCCACCAC GGCCGGTGGC ACGAGGCCAT GCGCTACGCA
CGGCTCGAAC TAGCGGTGGC TGCGCGCATC GAGGGGCCTG CGATCCTCGA GCAGGCCGAC
ACCACCGTGT GGCTCGAACC CGGTTTCCAC GCCGAGGTCG ACGCGCACGG CAACCTGCTG
GTGAGGCTGT CATGA
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| Protein sequence | MSSTSKSLVV GVDVGGTFTD LFVLDEANGS ARIVKVPSTR GEEARGFMNG VARVADSAAA
IATIVHGTTV GTNALLERKV ARTGIITTRG FRDVLEMRRR DRPQTWGLRG SFVPVVPRDL
RREVDERVLA DGTLHTPVDL DQVRAEARSL LEAGCEAVCV FFINTYANPE NERLAVAAVR
ELWPNPHVTS ASEVLPEIRE FERCSTATLN AALQPVVGSY LGRLEADLRA QGFAGELLVV
QSNGGVMSRQ TASDLPVRTA LSGPAAGVIA CAAIARAAGF PNVITGDMGG TSFDVSLVAN
GEAALAAQTA IEFGMVIRSP MIQIETIGAG GGSIASVDAS GMLQVGPESA GSVPGPACYG
RGNMRPTVTD ANVLLGRIAA DRPLGGGLLA ALDAEKSRQA IEEHVARPLG LDVHAAAEAI
LTVANARMAG AIRLVSIERG HDPRRFAYMP FGGGGALHVC AMMREVGVAT GIVPRYPGVT
SALGCVIADM RHDAVQTLNR PLAELDVADL QRRIDELSAA CQQRLDSSGV RFDEVREVVA
LDMLYAGQTH TLPVVLADAG QAPVTAASIR TAFEAAYTAA FGRVLDGIPI RVMNLRYARI
GVRPKFDLKV LAPEGRGSTA PLGTQRVFHH GRWHEAMRYA RLELAVAARI EGPAILEQAD
TTVWLEPGFH AEVDAHGNLL VRLS
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