| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0802 |
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| Symbol | |
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| ID | 7971854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 883881 |
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| End bp | 885566 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644791400 |
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| Product | 5-oxoprolinase (ATP-hydrolyzing) |
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| Protein accession | YP_002942721 |
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| Protein GI | 239813811 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.36294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGACA CCCTCGACCC CGTCACGCTC GCCGTGCTGC GCGGCCGCCT CGAACAGGTG
GCCGACGAGA TGGACGCCAC GCTCTACCGC AGCGCGTTCA ATCCCATCAT TGCCGAGGCG
CACGACGCCT GCCACGGCCT CTACGACGCC ACCACCGGCG ACACGCTGGT GCAGGGCAAG
TCGGGCCTGC CGGTGTTCGT GGGCGCGATG GCCTTCGCGG TGCGCGCCAC GGCGAAGGCC
GCCGCGCCGC GCGGCGGCAT GCAGGACGGC GACATCTGGA TCAGCAACGA CGCCTACGAC
GGCGGCACGC ACGCCAACGA CTTCAAGCTG GTCAAGCCCT TCTTCCGCAA CGGCAAGCTG
TATTGCTACA TGGCCTCGGC CGCGCACTGG CACGACGTGG GCGGCGCGGT GCCCGGCAAC
TACAACCCGG CCGCCACCGA GTGCTGGCAG GAGGCGGTGC AGATTCCGCC CGTGCGCATC
GTGCAGGGCG GCGTGCTCGA CGCCGACGTG CTCGCCATCC TGCAGGCCAA CACGCGCCTG
CCCGACAGCC TCTGGGGCGA CCTCAACGGC CAGCTCGCCG CGCTGGAGCT CGGCGCCAAG
CGCCTGCACG GCCTGCTCGA CGAATACGGC GACGGCCTGG TGCTGAATGC GCTCGGCGAG
CTGCGCAGCC GTGCGCTGCG CCTCATGCGC GCGCACATCG CCTCGCTGCC CGACGGCCGC
TACAGCTTCG AGGACGTGCT CGACAACGAC GGCATCGTCA ACCAGCCGCT CACCATCGCG
CTCGACATGA CGGTGGCCGG CGACCGGCTC ACGCTCGACT TCTCGCGCAC CTCGCCGCAA
TGCGCGGGGC CGGTGAACAT CTCGCGCGCC ACGGCGGTCG CGGCCTGCTA CGTTGCGCTC
AAGCACCTGT TCCCCGACGT GCCCGCGAAC GCCGGCGTGC TCGACGCGGT CGACTTCGTG
ATTCCCGACA AGCTGGTGAT CAGCGCCGAG CGCCCGCGCC CGGTGGGCGG CTACACCGAG
ACCATCCTGC GCATGATCGA CGTGATCTTC AGCGCCGCCG CGCAAGCCGA CTCCACGCGC
GCCGTGGCGC AGGCCTACGG CACCATCAAC GCGCTGTCGA TCGCGGGCCA CCGCAGCGAC
AAGGGCCGCG AAGGCCAGCG CTGGGTGATG TTCAGCTTCT TCGGCGGCGG CCACGGCGGC
CACTCGGGCG GCGACGGCCT GTCGCACGGC AACGCGCCGA TCTCGACCGC GACGATTCCG
CCGCTCGAAA TCCTCGAGGC CGCGTACCCC GTGCGCTTCA CCGAATGGTC GCTGCGCGCC
GACTCGGGCG GCGACGGCCG GCACCGCGGT GGCCTCGGCG CCGTCTACGA GATCGAACTG
CTCGAGAAGG ACGCCGAGGT GTTCGTCTTC GGCGAGCGCG GCACCTCGCC GCCCAAGGGC
ATCGCGGGCG GCGGCGCGGG TGCCCTCAAC GTGTTCCGCT ACGAGAACGC GGGCGAGTGG
CACACGCCGC CCATGGTGTC GAAGATGCGC GGCATCCAGC TTGCGCGCGG CGAGCGCGTG
CGGCTCGAAA CGCCCGGCGG CGGCGGCTGG GGCCGCGCCG GCGAGCGCTC CGCTTCGCAG
CGCGAAGCCG ATGCCGCCAT GGGCTACGTC ACGGCCGCTA GCAGCGGCAA GAAAGCATCC
GAATGA
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| Protein sequence | MNDTLDPVTL AVLRGRLEQV ADEMDATLYR SAFNPIIAEA HDACHGLYDA TTGDTLVQGK
SGLPVFVGAM AFAVRATAKA AAPRGGMQDG DIWISNDAYD GGTHANDFKL VKPFFRNGKL
YCYMASAAHW HDVGGAVPGN YNPAATECWQ EAVQIPPVRI VQGGVLDADV LAILQANTRL
PDSLWGDLNG QLAALELGAK RLHGLLDEYG DGLVLNALGE LRSRALRLMR AHIASLPDGR
YSFEDVLDND GIVNQPLTIA LDMTVAGDRL TLDFSRTSPQ CAGPVNISRA TAVAACYVAL
KHLFPDVPAN AGVLDAVDFV IPDKLVISAE RPRPVGGYTE TILRMIDVIF SAAAQADSTR
AVAQAYGTIN ALSIAGHRSD KGREGQRWVM FSFFGGGHGG HSGGDGLSHG NAPISTATIP
PLEILEAAYP VRFTEWSLRA DSGGDGRHRG GLGAVYEIEL LEKDAEVFVF GERGTSPPKG
IAGGGAGALN VFRYENAGEW HTPPMVSKMR GIQLARGERV RLETPGGGGW GRAGERSASQ
READAAMGYV TAASSGKKAS E
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