| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0799 |
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| Symbol | |
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| ID | 7971851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 881042 |
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| End bp | 881557 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791397 |
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| Product | 3-isopropylmalate dehydratase, small subunit |
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| Protein accession | YP_002942718 |
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| Protein GI | 239813808 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR02087] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.357805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCGG AAACCCTGCA CCGGGTGTGG CGCCTGGGCG CCGACATCGA CACCGATGCG
CTCGCGCCCG GCCATGCGAT GAAGCACGGC ATCGACGTGA TCGCGAAGCA TTGCCTCGAA
GCCATCCGCC CCGATTTCGC GCGCGGCGTG CGCCCCGGCG ACGTGATCGT GGCCGGCCCG
AACTTCGGCA TCGGCTCGTC GCGTGAGCAG GCCGCGGCCG TGCTCGTGCA GCTGGGCGTG
GCCGCAGTGA TTGCGCCTTC GTACAGCGGC CTGTATTTCC GCAATGCCTT CAACGTGGGC
CTGCTGCTCC TGACCTGCGC CGAGGCCGAG TCGCTGCAGG ACGGCGAACG CATCGCGCTC
GACACCCGCA CGCCCGCAGT GCGCACCGCC GATGCGCGCA TGCTCGCCTG CGAGCCCGTG
CCGGGTTTCC TGATGGACAT GGTCGATGCC GGCGGCCTGC TGCAGCTGCT GCGCCGACGC
ATCGCCGCCA AGAAAGAAGC CGATGCACAG CGCTGA
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| Protein sequence | MTAETLHRVW RLGADIDTDA LAPGHAMKHG IDVIAKHCLE AIRPDFARGV RPGDVIVAGP
NFGIGSSREQ AAAVLVQLGV AAVIAPSYSG LYFRNAFNVG LLLLTCAEAE SLQDGERIAL
DTRTPAVRTA DARMLACEPV PGFLMDMVDA GGLLQLLRRR IAAKKEADAQ R
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