| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0795 |
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| Symbol | |
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| ID | 7971847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 877284 |
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| End bp | 878045 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644791393 |
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| Product | ABC transporter related |
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| Protein accession | YP_002942714 |
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| Protein GI | 239813804 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.213138 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAGG CGCTGCTGGC CGTGGGCGGA CTCTCGCGTT CCTTCGGCGG ACTGAAGGCC
GTGCAGGACG TCAGCCTGTC GGTGAAGGAG GGCAGCCTGA GCGCGCTGAT CGGCCCCAAC
GGTGCCGGCA AGACCACGCT CTTCGCGCTG ATGTCGGGCT TCCTCAAGCC CGACAGCGGC
ACCGTGCGCT TCGCGGGCCA GGACATCACC GGCCGCGAGC CGCACCGCAA TGCGCTGCTC
GGCATGACGC GCACCTTCCA GATCGTCAAG CCTTTTGCGG CGCAGACGGT GCGCGAGAAC
ATCGCGGTCG GTGCGCACCT GCACCTGCGC GGCCGCCGCG AGGCGCTGGC GCATGCCGAG
GCCATCGCGC TGCGCGTGGG CCTCGCGCCG CAGCTCGACA AGGCCGCTTC GGACCTCACG
GTGGCTGGCC GCAAGCGGCT TGAACTGGCG CGCGCGCTGG CCACGCGGCC GCGCCTGCTG
CTGCTCGACG AAGTGCTGGC CGGCCTCAAC CCGCAGGAGA TCGCCGAGAT GATGCCGGTG
GTGCGCGGCA TCGCCGACAG CGGCGTCACG GTGCTGATGA TCGAGCACGT GATGCAGGCG
GTGATGCACC TGGCCGAGCA TGTGTGGGTG CTGGCGCAGG GCCAGCTGAT TGCCGAAGGC
AGTCCGGCGC AAGTGACCTC CGACGACAAG GTCGTCGAGG CCTACCTGGG CCATGGCACC
GCGGCGCGGC TGCGCAAGGC CGCTTCGGGA GCTGGCGAAT GA
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| Protein sequence | MTEALLAVGG LSRSFGGLKA VQDVSLSVKE GSLSALIGPN GAGKTTLFAL MSGFLKPDSG
TVRFAGQDIT GREPHRNALL GMTRTFQIVK PFAAQTVREN IAVGAHLHLR GRREALAHAE
AIALRVGLAP QLDKAASDLT VAGRKRLELA RALATRPRLL LLDEVLAGLN PQEIAEMMPV
VRGIADSGVT VLMIEHVMQA VMHLAEHVWV LAQGQLIAEG SPAQVTSDDK VVEAYLGHGT
AARLRKAASG AGE
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