| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0793 |
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| Symbol | |
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| ID | 7971845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 875439 |
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| End bp | 876311 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644791391 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_002942712 |
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| Protein GI | 239813802 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.806317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGATC TAAGCATCCT CTTCCCCTCG ATCCTGAACG GCCTCACCAC AGGCGCCGTG
TACGCATTGA TCGCGCTGGG ACTCACGCTG ATCTACGGCG TGCTTCACAT CATCAACTTC
GCCCACGGCG CCTGCCTGAT GCTCGCGCTG TACGCCGTCT ACTTTCTCAA GGAGCGCTGG
GGCATCGACC CGTACATGGC GCTGCCCATC GCGGTGGCCG GCATGTTCGC GCTCGGCTAT
GCGCTGCAGC GCATCGTCAT CAACCGCGCG GGCCACGGCA AGGACGAGAA CATCCTGCTC
GCCACGCTCG GCATCGCCAT CGTCATGGAG AACCTCGCGC TGCTGTTCTT CAAGTCGGAC
ACGCGCAGCA TCGACACCGC CTACTCGCTC AGCACCGTCG CCATCGGCCC CGCCATGATC
GCCGTGCCCA AGCTCGTGGC CTTCGCGGGG GCGCTCGTGG TGTCGGGCAT CCTGTTCTGG
ATCATGGGCC GCACCGACCT CGGCCGCGCC ATCCGCGCCG TCGCCAAGGA GAAGGAGGGC
GCCAAGCTCA TGGGCATCGA CGTCGACCAT GTCTACGCCA TGAGCTTCGG CATCGGCCTG
GCCTGCCTCG GCGCGGCGGC CTGCTTTCTG CTGCCGGCCT ACTACGTCAA CCCGCAGGTG
GGCGGCGGCT TCGTGCTCGT GGCCTTCACC ATCGTGGTGC TCGGCGGCAT GGGCAGCTTC
GTCGGCGCGC TCATCGGCGG CCTCCTGGTC GGCGTGGTCG AGTCGCTCGG CGGGCTGTAC
CTGGGCGAAT CGCTCGGGCA GATCGGCATC TTCGCGATCT TCATCGGCGT GGTGCTGTTC
CGTCCCCAGG GCATGTTCGG AGCCAGGGCA TGA
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| Protein sequence | MFDLSILFPS ILNGLTTGAV YALIALGLTL IYGVLHIINF AHGACLMLAL YAVYFLKERW
GIDPYMALPI AVAGMFALGY ALQRIVINRA GHGKDENILL ATLGIAIVME NLALLFFKSD
TRSIDTAYSL STVAIGPAMI AVPKLVAFAG ALVVSGILFW IMGRTDLGRA IRAVAKEKEG
AKLMGIDVDH VYAMSFGIGL ACLGAAACFL LPAYYVNPQV GGGFVLVAFT IVVLGGMGSF
VGALIGGLLV GVVESLGGLY LGESLGQIGI FAIFIGVVLF RPQGMFGARA
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