| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0783 |
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| Symbol | |
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| ID | 7971835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 865174 |
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| End bp | 866700 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791381 |
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| Product | Galactarate dehydratase |
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| Protein accession | YP_002942702 |
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| Protein GI | 239813792 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2721] Altronate dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCCT TCATTCGCCT GCATCCGGCC GACGATGTCG TGATCGCGCG CAGCCAGCTG
GTCGGCGGCG CCAAGGTCGA AGACTTTGCC GTGCGCGGCC TGATTCCCGC CGGGCACAAG
GTGGCGACGC ATGCCATTGC CGCCGGCGAA CCGGTGCGCC GCTACAACCA GATCATCGGC
TTCGCGAGCA AGCCCATTGC GGCCGGCGAG CATGTGCACA CGCACAACCT CGACATGGGC
CCCGACAAGG GCGACTTCGA ACGCGACTAC GCCTTCGGCG CCGACGTGAA GCCCGCGCCC
ACGAAGCGCG AGGCCACCTT CATGGGCATC AGGCGGGCCG ACGGCCGCGT GGCCACGCGC
AACTACATCG GCGTGCTCAC GAGCGTGAAC TGCTCGGCCA CCGCGGCGCG CGCCATTGCG
GACCACTTCT CGCGCAAGAC CAATCCATCG GCGCTGGCCG GCTACCCGAA CGTCGACGGC
ATCGTGGCGC TCACCCACGG CACGGGCTGC GGCATGGACA CACAAGGCAT GGGCATGCAG
ATCCTGGAGC GCACGCTCAC GGGCTATGCC ACGCACCCCA ACTTCGCGGG CGTGCTGGTG
GTGGGCCTGG GCTGCGAGGC AAACCAGATC AACGCCTGGC TCGCGACCGG CCACCTGGCC
GAAGGCGAGA ACTTCCGCAC CTTCAACATC CAGGACACCG GCGGCACGCG CAAGACGGTG
GAGAAAGGCA TTGCGCTGAT CAACGAGATG CTGCCGCGCG CCAATGCGGT CAAGCGCGAG
CCCTGCAGCG CGGCGCACAT CACGATCGGG CTGCAGTGCG GCGGCTCGGA CGGTTACTCC
GGCATCAGCG CCAATCCGGC CCTCGGTGCG GCGGTCGACC TGCTGGTGGC GCACGGCGGC
ACGGCCATCC TGAGCGAGAC GCCCGAGGTC TATGGTGCCG AGCATCTGCT CACGCGCCGC
GCCGTCAAGC GCGAGGTCGG CCAGAAGCTG GTGGACCGCA TCAAGTGGTG GGAGCACTAC
ACCGAGATCA ACGAAGGCGA GATGAACAAC AACCCCTCGC CGGGCAACAA GGCGGGCGGC
CTGACGACCA TCCTCGAAAA ATCGCTCGGG GCCGTGGCCA AGGGCGGCAC GAGCAACCTC
GAGGCGGTGT ACGAATACGC CGAGCCGGTC ACGGCGCACG GCTTCGTCTA CATGGACACG
CCGGGCTACG ACCCGGTGAG CGCCACCGGG CAGGTCGCGG GCGGCGCGAA CATCATCTGC
TTCACCACCG GACGCGGCTC GGCCTACGGC TGCGCGCCCT CTCCTTCGCT CAAGCTTGCG
ACCAACTCGG CGCTGTGGCA GCGGCAGGAA GAAGACATGG ACATCAACTG CGGCGAGATC
GTGGATGGCA CCAGCTCGAT CCAGGAGATG GGCCAGCGCA TCTTCGAACT GGTGCTGGCC
ACCGCGTCCG GCGAGCCTTC GAAGAGCGAG AAACATGGCT ACGGCCAGAA TGAATTCGTG
CCGTGGCAAG TCGGCGCCGT GATGTAA
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| Protein sequence | MNPFIRLHPA DDVVIARSQL VGGAKVEDFA VRGLIPAGHK VATHAIAAGE PVRRYNQIIG
FASKPIAAGE HVHTHNLDMG PDKGDFERDY AFGADVKPAP TKREATFMGI RRADGRVATR
NYIGVLTSVN CSATAARAIA DHFSRKTNPS ALAGYPNVDG IVALTHGTGC GMDTQGMGMQ
ILERTLTGYA THPNFAGVLV VGLGCEANQI NAWLATGHLA EGENFRTFNI QDTGGTRKTV
EKGIALINEM LPRANAVKRE PCSAAHITIG LQCGGSDGYS GISANPALGA AVDLLVAHGG
TAILSETPEV YGAEHLLTRR AVKREVGQKL VDRIKWWEHY TEINEGEMNN NPSPGNKAGG
LTTILEKSLG AVAKGGTSNL EAVYEYAEPV TAHGFVYMDT PGYDPVSATG QVAGGANIIC
FTTGRGSAYG CAPSPSLKLA TNSALWQRQE EDMDINCGEI VDGTSSIQEM GQRIFELVLA
TASGEPSKSE KHGYGQNEFV PWQVGAVM
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