Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0775 |
Symbol | |
ID | 7971827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 856208 |
End bp | 858061 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644791373 |
Product | glycosyl transferase family 2 |
Protein accession | YP_002942694 |
Protein GI | 239813784 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGCAA GCCCCGAGGG TTGTGCCATC TCTTTGCAGA GTAGGGGGAA AGATTTGCCT ATCGATCAAG CGCGATACGC CCAATGGGCC GCGGCGTGCC GGTTCTCTGC CTTCACCGAC ACCGCCTACA GCGCGTGGAC ACGCGACGAA GCGTCCCGCC ACAAGGCAGA ACAGCCGGCG CTTCGCTCTG AGCTGGAGAA TCTTCCGTAC CGCGAGGGCT TGACCTTCGC CATTGCCGAC AGCGGCAGCG ACGAGGCATT GCACAGCACG CTGGCTTCGC TTTCCGCGCA GCTGTGCCAT CGCTTCGACG TGGTGGTGGC CTGCGACCCT TCGCGCGCCG AAGCGGTCGG CCATGCGCTC CTGTTCGTTC GCGATTCGAT CAACGTGCGG CTGGTGCCCG CGGGTGCGCC GGCCAGCCGG CTCGAACTGC AGCAGCTCGC GCTCGAGCAC ACGGCCGAGC CGTGGTTCGG CGTGATCCTC GCGGGCGACC GGCTCGCTGC GCAGGCCGTT TCGTCGATCC AGCTCACCCT CGCCAAATGG CCCGATGCGG CCGTCGCCTA TGCGGACGAG GACTGGATCG CAGAGGGCCA ACTGCGATGC AAGCCGCGCT TCAAGTCGGC ATGGGATCCG GAGGCGCAGC TCGGCTTCGA CCTGCTGGAC GGCCTGTGCG TGATGAGGCG CGCCAACGTC CTGGCGGCCG GAGGCTTTCG CGCCGAATTC GAGCCGGCCG CCGGCTACGA CCTGCACTGC AGGGTGGCCA TGCCGCTGCC CTGCAGCCAG GTGCGCCATG TTCCCTCGGT GCTGTACCAC CGGCAGGTCC CGCTGGTCAT CGATGCGGGC GACACGCGGC AGGCCGTCGA GGCCTATGCG GCGGCGGCCC GGCGGGTGGC GGCCGAGGCG GCGTTCCGGC AGGCGGGCTT GGCGGCCGAG GTGCTGCCCT CGCCGATCGC CGAGTTCGTC AACCATGTCC GCCGCCCGCT GCCCAGCCCC GCGCCACGGG TCAGCGTGCT CGTGCCGACG CGCGACCGCG CCAACCTGGT GAGGACCTGC CTGGACGGCC TGCTGCGCAA GACCGACTAT CCGGACTTCG AAGTCCTCAT CCTCGACAAC GACAGCGTCG AGCCGGCCAC GCTGTCCCTC TTCGCCGAGT TGGCCGCGGA CCCTCGCGTC AGCGTGCTGC GGGTGCCGGG GCCCTTCAAT TTTTCGGCCA TCAACAACGC CGGCGTGCAG GCCTCGACCG GCGAGGTGCT GCTCTTCCTG AACAACGACA TCGAGATCCT CGACGGCGGA TGGCTCAGGG AGATGGTCGG CGAAGCCATG CGGCCAGACA TCGGCTGCGT GGGCGCGAAG CTGCTGTACG GCGACGGCAC GGTCCAGCAT GCCGGCGTCA TGCTGCAGAG CGGCCCGCTG GCGATGCATG TGTGCCGCAC CGACAGCGCC ACCGACACCG GCCTGGACGG GCGGCTGGCC GGCACGCGCG ACTACCTGGC GGTCACGGGC GCCTGCCTGG CGGTCCGGCG CGCGGTGTTC GAGCAGGTGG GCGGCTTCGA CGGCGAGCAC CTGCCGGTGG CCTACAACGA CATCGACCTG TGCCTGAAGG TGAACGATGC GGGCTACCGC AACATCTGCA CGCCGTTCGC CTCGCTGCTG CACCTGGAGA GCGCCTCGCG CGGGCACGAC CATGTTTCCG AAGAGAAGCA GCAGCGGGCA GCGCGCGAGC AGGCGCATGC CAGCACCAAG TGGATCGATC GCTTCGAGCA CGACCCCTAT CACAACCCGA ATGTCCAGTG GGACTGGCTC ACCGGCGCAC ACCTCGCCCC CAACGTCGGC CAGCCCTGGC AGCTCGCGCG CTGA
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Protein sequence | MPASPEGCAI SLQSRGKDLP IDQARYAQWA AACRFSAFTD TAYSAWTRDE ASRHKAEQPA LRSELENLPY REGLTFAIAD SGSDEALHST LASLSAQLCH RFDVVVACDP SRAEAVGHAL LFVRDSINVR LVPAGAPASR LELQQLALEH TAEPWFGVIL AGDRLAAQAV SSIQLTLAKW PDAAVAYADE DWIAEGQLRC KPRFKSAWDP EAQLGFDLLD GLCVMRRANV LAAGGFRAEF EPAAGYDLHC RVAMPLPCSQ VRHVPSVLYH RQVPLVIDAG DTRQAVEAYA AAARRVAAEA AFRQAGLAAE VLPSPIAEFV NHVRRPLPSP APRVSVLVPT RDRANLVRTC LDGLLRKTDY PDFEVLILDN DSVEPATLSL FAELAADPRV SVLRVPGPFN FSAINNAGVQ ASTGEVLLFL NNDIEILDGG WLREMVGEAM RPDIGCVGAK LLYGDGTVQH AGVMLQSGPL AMHVCRTDSA TDTGLDGRLA GTRDYLAVTG ACLAVRRAVF EQVGGFDGEH LPVAYNDIDL CLKVNDAGYR NICTPFASLL HLESASRGHD HVSEEKQQRA AREQAHASTK WIDRFEHDPY HNPNVQWDWL TGAHLAPNVG QPWQLAR
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