Gene Vapar_0769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0769 
Symbol 
ID7971821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp845638 
End bp846696 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content62% 
IMG OID644791367 
Productglycosyl transferase family 2 
Protein accessionYP_002942688 
Protein GI239813778 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCCAA CGAACGCCCC CGCCGTGCCC GCCATCGACT CCATGCCCCT GTGGCCCAGC 
GTAGTGGTGA TCATCCCGTT CTACAACGGC GCCGATTTCA TCGAGCGTTC GGTGCGCAGC
GTGTTCGAGC AATCGGTGCC GGCGGCCGAG GTGATTGTGG TGAACGACGG CTCGCGGCCG
GAGGAGCGCG CGGCGCTCGA CGGGCTTGCG AAGCGCTATC CCTTTCGCAT TCTCGACAAG
GAGAATGGAG GGCAAGGCTC CGCACGCAAC GCCGGAGTGG CAGCGTCCAC TTCCGACTTC
ATCTGCTTCC TGGACCAGGA CGACTTCTAC CTGCCCAACC ACATCGAGAC TCTGGCGTCT
TCGATTCCGC AGGACGACCG GCTCTTCGGC TTTGTCTATG CCGACCTGTA CGAAGCCGAC
GCCGATGGAA ACGTGATCCG GACCGGCGTT GTGAAGGAGC ATGCGACGCA TCCCAAGCGA
AACATCAACG ACCTGCTGCG GCACGACATG TTCGTGCTGC CATCGGCCAC GCTGATCAGC
CGCAAGGCCT TCGAAGCCGT GGGTGGGTTC GACTCGCAGT TCATGGGCTT CGAGGATGAT
GACCTCTTCC TGCGCGTGTT CCGCAAGGGC TACAGCAATT ACTTTGTCGA CAAGGCCGTG
ACGGTGTGGT GCATCCATAC GGCAAGCACC TCGTTCGGCA TTCGCATGAT CCGCAGCCGC
TTCAAGTACT TCAAGAAGCT GGTGCAGATG TTTCCCGACG AGCACCAGCG CGGGCGCTAC
TACTTCCGCG ATTGTCTCGT GCCTCGGTTT CAGCCGTACT TCGTCAACCA TGCGATCGAG
TCGATCAAGA ACGACGACCA GTACCGCGAG GAAATGACCG CGATCCTCTT CGAGTACGGC
GCGATGGTGC TGGCCAACCC CTATGTCGGC CGCAAGAAGA AGCTGCGCCT GCGGACCACA
CTGTTTCTGC TGAAGCACAG CTCGCCCGGC ATGGTGCGCC TGGTCGGGGC GATCACGCGG
CTGCCGGGCG TGCGCAGCCT GCGGAAGCTC TATTCCTGA
 
Protein sequence
MIPTNAPAVP AIDSMPLWPS VVVIIPFYNG ADFIERSVRS VFEQSVPAAE VIVVNDGSRP 
EERAALDGLA KRYPFRILDK ENGGQGSARN AGVAASTSDF ICFLDQDDFY LPNHIETLAS
SIPQDDRLFG FVYADLYEAD ADGNVIRTGV VKEHATHPKR NINDLLRHDM FVLPSATLIS
RKAFEAVGGF DSQFMGFEDD DLFLRVFRKG YSNYFVDKAV TVWCIHTAST SFGIRMIRSR
FKYFKKLVQM FPDEHQRGRY YFRDCLVPRF QPYFVNHAIE SIKNDDQYRE EMTAILFEYG
AMVLANPYVG RKKKLRLRTT LFLLKHSSPG MVRLVGAITR LPGVRSLRKL YS