Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0769 |
Symbol | |
ID | 7971821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 845638 |
End bp | 846696 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644791367 |
Product | glycosyl transferase family 2 |
Protein accession | YP_002942688 |
Protein GI | 239813778 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCCAA CGAACGCCCC CGCCGTGCCC GCCATCGACT CCATGCCCCT GTGGCCCAGC GTAGTGGTGA TCATCCCGTT CTACAACGGC GCCGATTTCA TCGAGCGTTC GGTGCGCAGC GTGTTCGAGC AATCGGTGCC GGCGGCCGAG GTGATTGTGG TGAACGACGG CTCGCGGCCG GAGGAGCGCG CGGCGCTCGA CGGGCTTGCG AAGCGCTATC CCTTTCGCAT TCTCGACAAG GAGAATGGAG GGCAAGGCTC CGCACGCAAC GCCGGAGTGG CAGCGTCCAC TTCCGACTTC ATCTGCTTCC TGGACCAGGA CGACTTCTAC CTGCCCAACC ACATCGAGAC TCTGGCGTCT TCGATTCCGC AGGACGACCG GCTCTTCGGC TTTGTCTATG CCGACCTGTA CGAAGCCGAC GCCGATGGAA ACGTGATCCG GACCGGCGTT GTGAAGGAGC ATGCGACGCA TCCCAAGCGA AACATCAACG ACCTGCTGCG GCACGACATG TTCGTGCTGC CATCGGCCAC GCTGATCAGC CGCAAGGCCT TCGAAGCCGT GGGTGGGTTC GACTCGCAGT TCATGGGCTT CGAGGATGAT GACCTCTTCC TGCGCGTGTT CCGCAAGGGC TACAGCAATT ACTTTGTCGA CAAGGCCGTG ACGGTGTGGT GCATCCATAC GGCAAGCACC TCGTTCGGCA TTCGCATGAT CCGCAGCCGC TTCAAGTACT TCAAGAAGCT GGTGCAGATG TTTCCCGACG AGCACCAGCG CGGGCGCTAC TACTTCCGCG ATTGTCTCGT GCCTCGGTTT CAGCCGTACT TCGTCAACCA TGCGATCGAG TCGATCAAGA ACGACGACCA GTACCGCGAG GAAATGACCG CGATCCTCTT CGAGTACGGC GCGATGGTGC TGGCCAACCC CTATGTCGGC CGCAAGAAGA AGCTGCGCCT GCGGACCACA CTGTTTCTGC TGAAGCACAG CTCGCCCGGC ATGGTGCGCC TGGTCGGGGC GATCACGCGG CTGCCGGGCG TGCGCAGCCT GCGGAAGCTC TATTCCTGA
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Protein sequence | MIPTNAPAVP AIDSMPLWPS VVVIIPFYNG ADFIERSVRS VFEQSVPAAE VIVVNDGSRP EERAALDGLA KRYPFRILDK ENGGQGSARN AGVAASTSDF ICFLDQDDFY LPNHIETLAS SIPQDDRLFG FVYADLYEAD ADGNVIRTGV VKEHATHPKR NINDLLRHDM FVLPSATLIS RKAFEAVGGF DSQFMGFEDD DLFLRVFRKG YSNYFVDKAV TVWCIHTAST SFGIRMIRSR FKYFKKLVQM FPDEHQRGRY YFRDCLVPRF QPYFVNHAIE SIKNDDQYRE EMTAILFEYG AMVLANPYVG RKKKLRLRTT LFLLKHSSPG MVRLVGAITR LPGVRSLRKL YS
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