| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0765 |
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| Symbol | |
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| ID | 7971817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 840479 |
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| End bp | 841282 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644791363 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_002942684 |
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| Protein GI | 239813774 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAAG TTCATTCCAA TCTTCATCGA AGCGCGCTTT CTGATTGGTG GGAGGGCACC
CGCCGGACGG ACATCTGGTG GACCTTGGCC TGGTTCGACA TTGTTCTGCG CTATCGGCGC
TCGATGCTGG GACCGCTGTG GCTCACGCTG AGCATGGGCG CAATGATCGG CGGCATGGGC
CCGCTGTACA GCTCGCTTTT TGGCACGGAG CTTTCCAAGT TCTTCCCGCA TTTGGCTCTT
GGGATCATCT TCTGGGGCTT CTTCTCCAGC GTGGTTACAG ATGCCTGCAA TGCCTTCGTC
GGCTCATCGA ACTACCTCAA GCAAGGGTAC TTTCCGATCA GCCTCTTTGT CTGGCGCAGC
ATCGCGCGCA ACCTGATTCA GTTCGCTCAC CAGATCGTGC TGTATATCCC GGTTGCGCTC
TGGGCCGGCA TTTCACTGTC ATGGTCGGTA CTGCTTGTGC TGCCGGCCTT TGCGATCCTG
GTCATCAACG CACATGCCCT TGGCCTGCTG CTCGGCCTGA TCTGCACGCG CTACCGTGAC
GTAACCCAGA TCGTGACAAG CGTGATGCAG ATGCTGATGT TCCTGACGCC CGTTTTCTGG
CTTCCCGAGA GCCTTCCGGG ACGCGCTCAA TACATCCTGT GGAATCCTTT TGCGCAAATG
CTGGACCTGC TCCGTACGCC TTTGATGGGC GGCGTCGCCG AGCTGCACAG TTGGCTGGGG
ATCCTCGCTT GGACGGTTGT ATGCCTCGCG GCCTCTACGG CCTTGTTTTC GAAATACCGC
CGCCGCGTCG TTTATTGGCT CTGA
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| Protein sequence | MSQVHSNLHR SALSDWWEGT RRTDIWWTLA WFDIVLRYRR SMLGPLWLTL SMGAMIGGMG
PLYSSLFGTE LSKFFPHLAL GIIFWGFFSS VVTDACNAFV GSSNYLKQGY FPISLFVWRS
IARNLIQFAH QIVLYIPVAL WAGISLSWSV LLVLPAFAIL VINAHALGLL LGLICTRYRD
VTQIVTSVMQ MLMFLTPVFW LPESLPGRAQ YILWNPFAQM LDLLRTPLMG GVAELHSWLG
ILAWTVVCLA ASTALFSKYR RRVVYWL
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