| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0764 |
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| Symbol | |
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| ID | 7971816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 839774 |
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| End bp | 840475 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644791362 |
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| Product | ABC transporter related |
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| Protein accession | YP_002942683 |
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| Protein GI | 239813773 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTCA TCTCCCTCAA AAACGTCGCC GTCAACTTCC CAATCTATGG AGCGGGTGCA
GCATCGCTCA AGAAGACGCT GGCTGCGTCA GTCACCGGTG GCCGCTTCGG CAAGGAAACC
GGCGTCACGG TCGTGCAAGC GCTCAGCGAC GTCAACATCG AGCTCAAGAG CGGTGATCGG
CTAGGCTTGG TGGGACACAA CGGCGCGGGC AAGTCGACAC TGCTGCGCAC CTTGGCCGGG
GTCTACGAGC CATCCGCAGG CGAATTCACG CGCCAAGGTA CCGTGGCCAG CCTGATCGAC
CCATCGCTGG GCATCGAGAT GGACGCCACC GGTATCGAAA ACATCATGCT GCGCGGCCTC
GTCATGGGCA TGAGCAAGAA GCAACTCGAC AAGCTGACAC CAGAAATCTG CGAGTTCAGC
GGCTTGGGTG AATACGTCAA CATGCCAGTG CGCACCTACT CCACGGGCAT GATGATGCGG
CTGGCGTTCT CGATCTCGAC TAGCGTCGAA GCAGACATCC TCCTCATGGA TGAATGGCTG
TCAGTGGGCG ACGCCGAGTT CACGGAGAAA GCCGAGAAGC GCATGCGGGA CGTGGTCTCT
AAGTCCGGCA TTCTAGTACT GGCATCTCAT TCGCCAGAAT TGATTGCCAA GGAATGCAAT
CGGGTGATCC ATCTCGAGCA TGGACGAATC GTCGAACAGT AG
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| Protein sequence | MAFISLKNVA VNFPIYGAGA ASLKKTLAAS VTGGRFGKET GVTVVQALSD VNIELKSGDR
LGLVGHNGAG KSTLLRTLAG VYEPSAGEFT RQGTVASLID PSLGIEMDAT GIENIMLRGL
VMGMSKKQLD KLTPEICEFS GLGEYVNMPV RTYSTGMMMR LAFSISTSVE ADILLMDEWL
SVGDAEFTEK AEKRMRDVVS KSGILVLASH SPELIAKECN RVIHLEHGRI VEQ
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