Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0763 |
Symbol | |
ID | 7971815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 837587 |
End bp | 839764 |
Gene Length | 2178 bp |
Protein Length | 725 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644791361 |
Product | glycosyl transferase group 1 |
Protein accession | YP_002942682 |
Protein GI | 239813772 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCCAA TAGTGACACA GGTAAGAAAA GTGTTTCGTT CGATCAGTCC ATATGTGCGA AGGGCCGCGA AGGCCCTTTG GTGGCTGCTG ACTCCTTGGC GACTTCCAAC GCGTTTTCGT TTTCTGCGAG AGCGATCGCA ACGGGAGTTG CAGGATGCTG CATTGGCGAG ATTGCTGGAG CGGGAGCGGA CCGGAGTGGA GCGGCGCTTG GGTGGCCTGT CGAATGAGCC GGCAAAAGAG GTCAACTGGT TCGATGACGT CGACGTCGCG GCTGCCTCGG GCCTCGCGTT GGAAGATGTC CTGTGGCCTC GTCAGCCTGC GGCGACTATT GACGACCGCT GGGCCGCCGC TCGTTTTTGC ATTGACTTGC TGCGCGCGCG CAGGAGCATA TATGAGCAAT TCCCATCCGC CCTGAGCGAC GGCGCTGACG GGCCCTTCTT GGCATGGTTG AAGAGAGTTG GGGTTTCAGA ACTTGGACTG ACTCCCGACG GTTTGGATCA GATCACCGCG CTCCTCGCTT CGGATGTCGC AGCTCGAGCT CGCCGAGTCT TTCTCGACAA CGACGAATTG CGACTTGTGA TGCCGCATGG TTTGACCCCG GCGGGGCACA GAGGATTGTT TGAGTGGTTC ACGCAGTTTG GTCGAAAAGC AGGAGAGCCG CGGCTCGAGG AAATATGGTG GTTGTTTCTG GTGGCGAGAG AGCAAGCCCC ACTAGAACTT GCGCGAGCGT ATTGGTTCAC GCCCTCGTGG CAAAGCCGCT TTCCGGATGG CTTGACGCAT TTCGGCCGAG GGGCTTTCAT TGCGTGGTGC GAGAAGGCCT TCGGAATGCG CGGAGCGTGG TTGAAGGAGG TGTCATGGAG CGAGCTGTTG CCACCAGCAC ACGAGCAGTT GCGGAGCGCC TATTGGGCAA GGCCTGAGTG GCGTGATCTT CATCCCCACG CCATGCAGGA TGTCGCGGCC GCACGCGCTT TCATTGAGTG GTTGCGGCTG CCAGATGCTA GGCTTGCCCC CGAGGCGTCG ATTTGGGTCC GGCAACTCGA TGCGACTTCT CAAGCCCCGC AGTTGGCGGC GCTTGGCATC AACGTCGTTG GGCATTTCTG CTACCCGTCC GGGCTTCGCG TTTCCGCGGA GTCCATCGTC GAAGGATTGA GGCTTGCCGG CGCGCATACC TCGCTCCGCG ATGTTCGAAC CGACATCGAC GACGAGCCAC GTCATATGGA GTTTCGTGGC AGCGAGTGCC ATGACATTAC CCTTGTGCAC ACGCAGCCGG AGCCGTTCTT CGAATCGGCC TATCAGCGCG CCGATCTTCA TGCGCGCATG CCTCGAACCT ACCGTATTGC ATACTGGTAT TGGGAATTCG ATTCGGTGCC ATCGTCTTGG CAGGTGCATG CTCAGCAAGT CGACGAGGTT TGGACGGCCA CGGAGTTCGT GGCGGGCGGG TTACGAGAGC GTCTGTCCGT ACCTGTCAGG ACACTATTTC CGGGTGTGCG TCTGGCTCCT TATCAGCGTC GCGACCGGAC GGCATTTGGA CTGGATCCCG AAAGATTCAC GTTCCTCTTT ACCTTCCACA TGATGAGCGT GATGGAGCGC AAGAATCCCT TAGGTCTTCT TCGGGCATTC AAGCGCGCAT TTGCCGAGGA CGAACCCGTG ACACTGGTTC TCAAGACTTC TTTCGGCGAC CGGCACCCCG AACAGTTCGC GATACTGCAG AAGGCTGCGG AGGGGCGCAA TGTCAGGTTG ATCAACGAGG TCTACTCCGC AGATCACGTT CTATCGTTGA TGGACGCCTG TGACGCTTAT GTTTCGTTGC ACCGCAGCGA GGGACTGGGA TTGACGATGG CGGAAGCGAT GCTCATGGGT AAGCCGGTCA TCGCTACGAA ATTCTCCGGC AACGTCGATT TCATGGACGA TAGCAACAGC TTGCTCGTTT CATATGAGTT GGTCCGACTT GACAAACCAA TTCCGCCTTA TGACGTGGAC CTCGAGTGGG CCGAGCCATC GGTCGAACAT GCGGCGCAAC TCATGAGGCG TGTCTATGAC AATCAGAGCT GGGCTCGTGA GCTGGGTCAA AGAGCCAAGT TGAGTGCTGA AGCAAATCTT TCGCTCGAGG TTGCAGGTCG AAAGATTGCG AAGCGTCTGG AAGAAATTAG AGCCCTGCGA AGGAATGTGC AGAGCTAA
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Protein sequence | MNPIVTQVRK VFRSISPYVR RAAKALWWLL TPWRLPTRFR FLRERSQREL QDAALARLLE RERTGVERRL GGLSNEPAKE VNWFDDVDVA AASGLALEDV LWPRQPAATI DDRWAAARFC IDLLRARRSI YEQFPSALSD GADGPFLAWL KRVGVSELGL TPDGLDQITA LLASDVAARA RRVFLDNDEL RLVMPHGLTP AGHRGLFEWF TQFGRKAGEP RLEEIWWLFL VAREQAPLEL ARAYWFTPSW QSRFPDGLTH FGRGAFIAWC EKAFGMRGAW LKEVSWSELL PPAHEQLRSA YWARPEWRDL HPHAMQDVAA ARAFIEWLRL PDARLAPEAS IWVRQLDATS QAPQLAALGI NVVGHFCYPS GLRVSAESIV EGLRLAGAHT SLRDVRTDID DEPRHMEFRG SECHDITLVH TQPEPFFESA YQRADLHARM PRTYRIAYWY WEFDSVPSSW QVHAQQVDEV WTATEFVAGG LRERLSVPVR TLFPGVRLAP YQRRDRTAFG LDPERFTFLF TFHMMSVMER KNPLGLLRAF KRAFAEDEPV TLVLKTSFGD RHPEQFAILQ KAAEGRNVRL INEVYSADHV LSLMDACDAY VSLHRSEGLG LTMAEAMLMG KPVIATKFSG NVDFMDDSNS LLVSYELVRL DKPIPPYDVD LEWAEPSVEH AAQLMRRVYD NQSWARELGQ RAKLSAEANL SLEVAGRKIA KRLEEIRALR RNVQS
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