| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0763 |
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| Symbol | |
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| ID | 7971815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 837587 |
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| End bp | 839764 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644791361 |
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| Product | glycosyl transferase group 1 |
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| Protein accession | YP_002942682 |
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| Protein GI | 239813772 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCAA TAGTGACACA GGTAAGAAAA GTGTTTCGTT CGATCAGTCC ATATGTGCGA
AGGGCCGCGA AGGCCCTTTG GTGGCTGCTG ACTCCTTGGC GACTTCCAAC GCGTTTTCGT
TTTCTGCGAG AGCGATCGCA ACGGGAGTTG CAGGATGCTG CATTGGCGAG ATTGCTGGAG
CGGGAGCGGA CCGGAGTGGA GCGGCGCTTG GGTGGCCTGT CGAATGAGCC GGCAAAAGAG
GTCAACTGGT TCGATGACGT CGACGTCGCG GCTGCCTCGG GCCTCGCGTT GGAAGATGTC
CTGTGGCCTC GTCAGCCTGC GGCGACTATT GACGACCGCT GGGCCGCCGC TCGTTTTTGC
ATTGACTTGC TGCGCGCGCG CAGGAGCATA TATGAGCAAT TCCCATCCGC CCTGAGCGAC
GGCGCTGACG GGCCCTTCTT GGCATGGTTG AAGAGAGTTG GGGTTTCAGA ACTTGGACTG
ACTCCCGACG GTTTGGATCA GATCACCGCG CTCCTCGCTT CGGATGTCGC AGCTCGAGCT
CGCCGAGTCT TTCTCGACAA CGACGAATTG CGACTTGTGA TGCCGCATGG TTTGACCCCG
GCGGGGCACA GAGGATTGTT TGAGTGGTTC ACGCAGTTTG GTCGAAAAGC AGGAGAGCCG
CGGCTCGAGG AAATATGGTG GTTGTTTCTG GTGGCGAGAG AGCAAGCCCC ACTAGAACTT
GCGCGAGCGT ATTGGTTCAC GCCCTCGTGG CAAAGCCGCT TTCCGGATGG CTTGACGCAT
TTCGGCCGAG GGGCTTTCAT TGCGTGGTGC GAGAAGGCCT TCGGAATGCG CGGAGCGTGG
TTGAAGGAGG TGTCATGGAG CGAGCTGTTG CCACCAGCAC ACGAGCAGTT GCGGAGCGCC
TATTGGGCAA GGCCTGAGTG GCGTGATCTT CATCCCCACG CCATGCAGGA TGTCGCGGCC
GCACGCGCTT TCATTGAGTG GTTGCGGCTG CCAGATGCTA GGCTTGCCCC CGAGGCGTCG
ATTTGGGTCC GGCAACTCGA TGCGACTTCT CAAGCCCCGC AGTTGGCGGC GCTTGGCATC
AACGTCGTTG GGCATTTCTG CTACCCGTCC GGGCTTCGCG TTTCCGCGGA GTCCATCGTC
GAAGGATTGA GGCTTGCCGG CGCGCATACC TCGCTCCGCG ATGTTCGAAC CGACATCGAC
GACGAGCCAC GTCATATGGA GTTTCGTGGC AGCGAGTGCC ATGACATTAC CCTTGTGCAC
ACGCAGCCGG AGCCGTTCTT CGAATCGGCC TATCAGCGCG CCGATCTTCA TGCGCGCATG
CCTCGAACCT ACCGTATTGC ATACTGGTAT TGGGAATTCG ATTCGGTGCC ATCGTCTTGG
CAGGTGCATG CTCAGCAAGT CGACGAGGTT TGGACGGCCA CGGAGTTCGT GGCGGGCGGG
TTACGAGAGC GTCTGTCCGT ACCTGTCAGG ACACTATTTC CGGGTGTGCG TCTGGCTCCT
TATCAGCGTC GCGACCGGAC GGCATTTGGA CTGGATCCCG AAAGATTCAC GTTCCTCTTT
ACCTTCCACA TGATGAGCGT GATGGAGCGC AAGAATCCCT TAGGTCTTCT TCGGGCATTC
AAGCGCGCAT TTGCCGAGGA CGAACCCGTG ACACTGGTTC TCAAGACTTC TTTCGGCGAC
CGGCACCCCG AACAGTTCGC GATACTGCAG AAGGCTGCGG AGGGGCGCAA TGTCAGGTTG
ATCAACGAGG TCTACTCCGC AGATCACGTT CTATCGTTGA TGGACGCCTG TGACGCTTAT
GTTTCGTTGC ACCGCAGCGA GGGACTGGGA TTGACGATGG CGGAAGCGAT GCTCATGGGT
AAGCCGGTCA TCGCTACGAA ATTCTCCGGC AACGTCGATT TCATGGACGA TAGCAACAGC
TTGCTCGTTT CATATGAGTT GGTCCGACTT GACAAACCAA TTCCGCCTTA TGACGTGGAC
CTCGAGTGGG CCGAGCCATC GGTCGAACAT GCGGCGCAAC TCATGAGGCG TGTCTATGAC
AATCAGAGCT GGGCTCGTGA GCTGGGTCAA AGAGCCAAGT TGAGTGCTGA AGCAAATCTT
TCGCTCGAGG TTGCAGGTCG AAAGATTGCG AAGCGTCTGG AAGAAATTAG AGCCCTGCGA
AGGAATGTGC AGAGCTAA
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| Protein sequence | MNPIVTQVRK VFRSISPYVR RAAKALWWLL TPWRLPTRFR FLRERSQREL QDAALARLLE
RERTGVERRL GGLSNEPAKE VNWFDDVDVA AASGLALEDV LWPRQPAATI DDRWAAARFC
IDLLRARRSI YEQFPSALSD GADGPFLAWL KRVGVSELGL TPDGLDQITA LLASDVAARA
RRVFLDNDEL RLVMPHGLTP AGHRGLFEWF TQFGRKAGEP RLEEIWWLFL VAREQAPLEL
ARAYWFTPSW QSRFPDGLTH FGRGAFIAWC EKAFGMRGAW LKEVSWSELL PPAHEQLRSA
YWARPEWRDL HPHAMQDVAA ARAFIEWLRL PDARLAPEAS IWVRQLDATS QAPQLAALGI
NVVGHFCYPS GLRVSAESIV EGLRLAGAHT SLRDVRTDID DEPRHMEFRG SECHDITLVH
TQPEPFFESA YQRADLHARM PRTYRIAYWY WEFDSVPSSW QVHAQQVDEV WTATEFVAGG
LRERLSVPVR TLFPGVRLAP YQRRDRTAFG LDPERFTFLF TFHMMSVMER KNPLGLLRAF
KRAFAEDEPV TLVLKTSFGD RHPEQFAILQ KAAEGRNVRL INEVYSADHV LSLMDACDAY
VSLHRSEGLG LTMAEAMLMG KPVIATKFSG NVDFMDDSNS LLVSYELVRL DKPIPPYDVD
LEWAEPSVEH AAQLMRRVYD NQSWARELGQ RAKLSAEANL SLEVAGRKIA KRLEEIRALR
RNVQS
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