| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0758 |
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| Symbol | |
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| ID | 7971810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 828614 |
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| End bp | 831700 |
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| Gene Length | 3087 bp |
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| Protein Length | 1028 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644791356 |
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| Product | glycosyl transferase group 1 |
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| Protein accession | YP_002942677 |
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| Protein GI | 239813767 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATCG TCATCGATCT CCAGGGCGCC CTGTCCCAAG GAAACAGAAA ACGCGGTATC
GGACGCTACA CGTCCTCGCT AGCTCAGGCG ATCGCCCGGC GAGCACGGAA TCACGAAATT
GTCTTGGCAT TGAACGGACG CTTTCCGGAT GCCATTGACG AGATCCAGTC CACGTTCGAC
GGAATGGTCG AGCCGCGCAA TTTTCGCGTT TGGCACCCTC CTCTCTATTC AGATCGTGCG
AGTCCCGGCG GCCGCAGGGC AAGAGAGAAA CTCTACGAAG CTTTTCTGGC CTCGCTTCAA
CCGGATGTGG TGCATGTTTC CAGTCTGTTC GAGGGGCTGG ATGATGCTGC CGTCACGAGC
ATTGGCAGCT TCGTTCGTCA GCCCACCGCC GTCACGCTCT ACGACCTGAT CCCTCTGATC
AATGCCCGCT CCTATCTGGA AGAAGACAGG ACCCGCTCGT GGTACATGCG AAAGATTGAG
TCGCTCGGCC GCGCCAACAT GTGGTTGGCA ATCTCGGAGT CTTCTCGCCA GGAAGGCATC
GACCATCTCG GCTTGGCGGA AGACCGCTGC ATCAATATTT CGACTGCTGC TTACGATCAT
TTCAAACCGG CAAGGCCGAC CGCGCAGCGT GAGCAGGAGC TTCGCGATCA CTACGGCTTG
AACCAACCTT TTGTGATGTA CACGGGCGGC ATCGATGTGC GAAAGAATCT CGATGGCCTG
GTGCGCGCTT TTGGGCTTCT TCCGCCCGAA CTCGCGGCAC GACATCAACT GGCAATCGTC
TGCTCTGCCC GTCCCGAAGA TCGCAAGGCA CTGCTAGAAC TGGCAGAAAA ATCAGGTTTG
GAAGGCGGCA AGCTCGTTGT CACCGGCTTC GTGCCGGAGC AGGATCTCGT GGATCTCTAC
AACCTGTGCA GCTTGTTCGT CTTCCCTTCA TGGCACGAAG GGTTCGGACT GCCTGCGCTG
GAGGCGATGC ATTGCGGCGC CGTAGTGATC GCAGCCAATA CTTCGAGCCT GCCGGAAGTC
CTCGGTCGGG AAGATGCGCT GTTCGCCCCG AGAAACGATG AGGCTATGGC CATGAAGATG
GTCCAGGGAT TGACCGACGA AGGATTCCGT TCGGTTCTGA AAGAACATGG ACTGAGACAA
GCACAGAAAT TCTCTTGGGA TGAATCGGCT CGACGTGCCA TCGAAGGGCT CGAGGCGCTC
TATCGCTCAT CGAGCTGCGC ACCATGCAAG CCCGAGTCGC GGCATTCACG CCCGCGTCTA
GCCTATCTCT CGCCACTGCC CCCACAACCG AGCGGCATTG CAGACTACAG CGCCGAATTG
CTTCCAGCCC TTGCGCGACA CTACGAAATC GACCTCGTGA CCGGTCTAGC TGCCACCAGC
GACCCGGGCC TGACAGCGTC CTTTCCCCTT CGTTCGCTCG AGTGGTTCCG AAGGAACTCC
AACCTCTTCG ACCGCGTGCT CTATCACTTC GGGAACTCGG AATTTCACGA GCACATGTTC
CCCTTGCTGA AGGAAATACC CGGCGTCGTC GTGTTGCACG ATTTCTATCT GAGCGGGGTT
CAAGCATTCA GGGAGTTCGG CACTGGACAG CCGCATGCAT GGGCCCGCGC ACTCTACGAC
TCGCACGGTT ATCCGGCAAT CATCCAGCGG TTTCGCACCG ACGATGTCGC GGACACCATC
TACAGATTCC CTTGTAGTCT TGACATCCTG CAGTACGCAC AAGGCGTGAT CGTGCACTCG
CCGCACTCGA TCGACCTCGC CCGGAACTGG TATGGATCGA TCGCCGACAA CCTGGAGATG
GTTCCGTTGC TACGTGCGCC AGCGGCAAAG GATCCTGGCG AGCGCCAGCG AGCGCGCGAC
GAGCTGGGAT TAAAACCGGA TGATTTTCTT GTGTGCAGCT TCGGACTCCT GGGCCCAACA
AAGCTGGTCC ATCGAGTGCT TCAGGCATGG CAGGCGTCCC CGCTTGCCAG AGACCCACGA
TGCAAATTGC GCTTCGTAGG CGAAAACCCT TCAGATGAGT ATGGCACCGA GTTGCTGCGT
CAGATTGCGC AGGGTGGCCG AGAGGAGGAC GTGGAGATCA CGGGTTGGGC CTCCTCTGAA
ACGTATCGCC AGTATCTTGC CGCAGCTGAT CTAGCGGTCC AGCTTCGGGC AAAGTCGCGC
GGGGAAACCT CTGCAGCAGT GCTCGATACG ATGAGTCGGA GCATACCGAC CATCGTCAAT
GCTCATGGCT CCATGGCCTT TCTGCCTCGC GATGCCGTTC TCATGCTCGA TGATGACTTT
GATGACGCGC AATTGATTGA AGCCCTCGAG AGCCAGTGGC GCGATCCGGC CGGACGTTTC
GCATTGGGAG CAAAGGGGCG GACCATCGTG GAGACGCTGC ACGCGCCTGC AGCCTGTGCA
AAGCTCTATG CTGAAGTGAT CGAGCGGTTC GTCCAGCGCG CCGATGCTGG CCGCACAGGA
TTAGTCCGAG CCATCGGGGC AGAAGATCCC CTGGCCCAAT CCGCAGAAGG CCACCACGAA
GCCCTCGAAT TGGCCTCGGC AATCGCCGAA AGCCTTCCGC TCCCGATGTC ACAGCGGCAG
TTGTTCATCG ATGTCTCCTA CCTGGCCCAG AGTGGCACAC AAACACAGCA AACGCTCGAG
TGCCTGATAC GAGAGGCGCT GGATGTTAGC CTCGAGGGCT ACAGGATCGA ACCTGTTCGT
ACATCAGAGA GTGACGGGCA GGGCTATTGC TATGCCAGAC GATTTGCGCT CGCGCTTCGA
AACCTCCCCG CCGACGCACT CGCCGACGAA CCGATCGACT TTCGTGCGGG GGATCTCTTT
GCCGTCCTGT CTGCATCGCC AGACTCGGCC GCCGAACACG CGGAGTTCTA CCGAAAATTA
CGCCACTCCG GCGTGCATGT CCGATTTTTT CAGATCGCCG CCGCTCCTGC CTTTACGGGT
CACGAGGGCT CGGGCGACGT GAAAGTTCAC CTCCTTCATC TGAATTCGAC GACCACACCT
GACAGCCGTT CCGATGAGCA GGCCGTCAAG GCTTTTCTTA GGTCTCTGAT CAACGGCGAC
ACGTTTTTCC GATCCGATCG CAGCTGA
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| Protein sequence | MRIVIDLQGA LSQGNRKRGI GRYTSSLAQA IARRARNHEI VLALNGRFPD AIDEIQSTFD
GMVEPRNFRV WHPPLYSDRA SPGGRRAREK LYEAFLASLQ PDVVHVSSLF EGLDDAAVTS
IGSFVRQPTA VTLYDLIPLI NARSYLEEDR TRSWYMRKIE SLGRANMWLA ISESSRQEGI
DHLGLAEDRC INISTAAYDH FKPARPTAQR EQELRDHYGL NQPFVMYTGG IDVRKNLDGL
VRAFGLLPPE LAARHQLAIV CSARPEDRKA LLELAEKSGL EGGKLVVTGF VPEQDLVDLY
NLCSLFVFPS WHEGFGLPAL EAMHCGAVVI AANTSSLPEV LGREDALFAP RNDEAMAMKM
VQGLTDEGFR SVLKEHGLRQ AQKFSWDESA RRAIEGLEAL YRSSSCAPCK PESRHSRPRL
AYLSPLPPQP SGIADYSAEL LPALARHYEI DLVTGLAATS DPGLTASFPL RSLEWFRRNS
NLFDRVLYHF GNSEFHEHMF PLLKEIPGVV VLHDFYLSGV QAFREFGTGQ PHAWARALYD
SHGYPAIIQR FRTDDVADTI YRFPCSLDIL QYAQGVIVHS PHSIDLARNW YGSIADNLEM
VPLLRAPAAK DPGERQRARD ELGLKPDDFL VCSFGLLGPT KLVHRVLQAW QASPLARDPR
CKLRFVGENP SDEYGTELLR QIAQGGREED VEITGWASSE TYRQYLAAAD LAVQLRAKSR
GETSAAVLDT MSRSIPTIVN AHGSMAFLPR DAVLMLDDDF DDAQLIEALE SQWRDPAGRF
ALGAKGRTIV ETLHAPAACA KLYAEVIERF VQRADAGRTG LVRAIGAEDP LAQSAEGHHE
ALELASAIAE SLPLPMSQRQ LFIDVSYLAQ SGTQTQQTLE CLIREALDVS LEGYRIEPVR
TSESDGQGYC YARRFALALR NLPADALADE PIDFRAGDLF AVLSASPDSA AEHAEFYRKL
RHSGVHVRFF QIAAAPAFTG HEGSGDVKVH LLHLNSTTTP DSRSDEQAVK AFLRSLINGD
TFFRSDRS
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