Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0757 |
Symbol | |
ID | 7971809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 827432 |
End bp | 828472 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644791355 |
Product | GDP-mannose 4,6-dehydratase |
Protein accession | YP_002942676 |
Protein GI | 239813766 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1089] GDP-D-mannose dehydratase |
TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA AATGCGCTGT CGTCACCGGT ATCACAGGCC AGGACGGAGC CTACTTGGCC GAGCTACTGC TTTCAAAAGG TTACGTCGTC CACGGCACCT ATCGCCGCAC CAGTTCGGTC AACTTCTGGC GTATCGAGGA GCTTGGCATT CAGGCTCATC CCGACCTTCA TCTCGTGGAA TACGACCTGA CGGACCTGGG CAGTTCGATT ACGCTGATCA AAGATGCAAA TCCCGACGAG GTCTATAACC TCGCGGCACA GAGCTTCGTC GGCGTCAGCT TCAATCAGCC TGCCGCCACG GCGCAGATCA CGGGCATCGG CGCGCTTCAC CTGCTCGAAG CCATCCGCCT GGTCAATCCC AAGATTCGCT TTTACCAAGC TTCGACCTCT GAAATGTTCG GCAAGGTGCA GGCCATTCCC CAGATAGAAG ACACCCCCTT CTACCCACGC AGCCCCTATG GCGTGGCCAA GCTCTACGCC CACTGGATGA CCATCAACTA CCGTGAGAGC TATGACATCT TCGGTTGCAG CGGCATTCTT TTCAATCACG AGAGCCCATT GCGCGGCCGA GAGTTCGTCA CCCGCAAGAT CACTGACGGC GTCGCGAAGA TCAAGCTGGG CAAGCTCGAC GTGCTGGAGC TAGGAAATCT CGACGCCAAG CGCGACTGGG GCTTTGCCAA GGAATATGTC GAGGGTATGT GGCGGATGCT GCAGGTCGAC GAGCCGGACA CTTACGTGCT TGCCACCAAC CGTACGGAAA CGGTGCGTGA TTTTGTCAGC ATGGCTTTCA AGGGCGCTGG CATCACTGTC GAGTTCAAAG GCGCAGGAGA GACGGAGTCC GCGGTCGACA CGACTACCGG CAAGACCGTG ATGCGGATCA ATCCGAAGTT CTATCGCCCG GCCGAGGTGG AGCTTTTGAT TGGCAACCCT GCAAAGGCTA AAGAAAAACT CGGCTGGGAA CCCTCCACTA CTTTGGAGCA ACTCTGCCAG ATGATGGTGG AGGCGGACAT TCGACGCAAC GGGCAGGGGT TTTCGTTTTG A
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Protein sequence | MKKKCAVVTG ITGQDGAYLA ELLLSKGYVV HGTYRRTSSV NFWRIEELGI QAHPDLHLVE YDLTDLGSSI TLIKDANPDE VYNLAAQSFV GVSFNQPAAT AQITGIGALH LLEAIRLVNP KIRFYQASTS EMFGKVQAIP QIEDTPFYPR SPYGVAKLYA HWMTINYRES YDIFGCSGIL FNHESPLRGR EFVTRKITDG VAKIKLGKLD VLELGNLDAK RDWGFAKEYV EGMWRMLQVD EPDTYVLATN RTETVRDFVS MAFKGAGITV EFKGAGETES AVDTTTGKTV MRINPKFYRP AEVELLIGNP AKAKEKLGWE PSTTLEQLCQ MMVEADIRRN GQGFSF
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