| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0752 |
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| Symbol | |
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| ID | 7971804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 823091 |
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| End bp | 824173 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644791350 |
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| Product | dTDP-glucose 4,6-dehydratase |
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| Protein accession | YP_002942671 |
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| Protein GI | 239813761 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
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| TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCTGG TAACCGGCGG CGCGGGCTTC ATCGGCGCCA ACTTCGTACT CGACTGGCTG
GCGCAGAGCG ACGAGCCTGT CGTGAACCTC GACAAGCTGA CCTATGCCGG CAACCTCGAG
ACGCTTGCGT CTCTCAAGGG CGACCCGCGG CACATCTTCG TGCAGGGCGA CATCGGCGAC
AGCGCGCTGG TCGACCGCCT CCTGGCCGAG CACAAACCGC GCGCCATCGT GAACTTTGCC
GCGGAATCGC ACGTCGATCG CTCCATTCAC GGCCCCGAAG ACTTCGTGCA GACCAACGTG
CTGGGCACCT TCCGCCTGCT CGAGTCCGTG CGCGGCCACT GGAGCGCGCT GCCGGCCGAG
CAGAAAACCG CCTTCCGCTT CCTGCACGTG TCGACCGATG AGGTCTACGG CTCGCTCTCC
AAGACCGACC CCGCCTTCAC AGAAGAAAAC AAGTACGAGC CCAACAGCCC CTACTCGGCC
AGCAAGGCTG CGAGCGACCA CCTCGTGCGC GCCTGGCACC ACACCTACGG CCTGCCGGTG
CTCACCACCA ACTGCTCCAA CAACTACGGG CCGTTCCACT TCCCCGAGAA GCTCATCCCG
CTGATGATCG TCAACGCCCT GGCCGGCAAG CCGCTGCCCG TGTATGGCGA CGGCATGCAG
GTGCGCGACT GGCTCTACGT GAAGGACCAC TGCAGCGCCA TCCGCCGCGT GCTCGAAGCC
GGCCGGCTCG GCGAGACCTA CAACGTCGGC GGCTGGAACG AGAAGCCCAA CATCGAGATC
GTCAACACCG TCTGCGCGCT GCTCGACGAA CTGCGCCCGC GCGCCGACGG CAAGCCCTAC
AAAGAGCAGA TTAGCTACGT CACCGACCGC CCCGGCCACG ACCGGCGCTA CGCCATCGAT
GCGCGCAAGC TCGAGCGCGA ACTCGGCTGG AAGCCCGCCG AAACCTTCGA CAGCGGCATC
CGCAAGACCG TCGAGTGGTA CCTGGCCCAT GGCGAATGGG TGCGCAACGT GCAAAGCGGC
GCTTACCGCG AATGGGTCGA GAAGCAATAC GACGCCGCAC CCGCGGCCAA GGCCGCGGCA
TGA
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| Protein sequence | MILVTGGAGF IGANFVLDWL AQSDEPVVNL DKLTYAGNLE TLASLKGDPR HIFVQGDIGD
SALVDRLLAE HKPRAIVNFA AESHVDRSIH GPEDFVQTNV LGTFRLLESV RGHWSALPAE
QKTAFRFLHV STDEVYGSLS KTDPAFTEEN KYEPNSPYSA SKAASDHLVR AWHHTYGLPV
LTTNCSNNYG PFHFPEKLIP LMIVNALAGK PLPVYGDGMQ VRDWLYVKDH CSAIRRVLEA
GRLGETYNVG GWNEKPNIEI VNTVCALLDE LRPRADGKPY KEQISYVTDR PGHDRRYAID
ARKLERELGW KPAETFDSGI RKTVEWYLAH GEWVRNVQSG AYREWVEKQY DAAPAAKAAA
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