Gene Vapar_0749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0749 
Symbol 
ID7971801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp819302 
End bp820018 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content69% 
IMG OID644791347 
Producthypothetical protein 
Protein accessionYP_002942668 
Protein GI239813758 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAACG CCAGCCAACC CTTCGACTTC AGTCAATTCG TCCCCGGATT CGATTTTCTG 
AAGAACCTTG CCGGCGGTGG CGCCGGCGGC GCGGCGGGCA GTGCGGTGCC CGGGTTGCCG 
AGCCTCGCGA GCTGGGTGGC CCCCACGCTG AGCGTGGAAG AGGTGGACAA GCGCATCCAG 
GAACTCAAGA CGGTGCAGTA TTGGCTCGAG CAGAACGGCC ACGCGCTCAA GGCCACCATC 
CAGGCGCTCG AAGTGCAAAA GATGACACTT TCGACCTTGC GCGGCATGAA CGTGCGGATG 
GAAGATATCG CCAGCGCGTT CACCAAGCAG GCGGCCGCCG TGGCGCCTGC CGCTGCTCCG 
GCACCTGCAG CAGCCGCGGC GCCGGCCGAA CCGGAAGCCG AGCCCGAGGA AGAAAAAGCC 
CCGGCACCGG CGAAGAAGGC GCGCAGCAAG CCGGCTTCGG CCGCTGCCGC TTCGGGCGGC 
AATGGCGCCG CCGGCGTGAT CGATCCGATG CAATGGTGGG GCTCGCTGAC CGAGCAGTTC 
CAGCAGATCG CGAGTTCGGC GCTGCAGGAT GCGGCCCAGC TCAAGGTGCC GGCCAGGGCC 
CAGCCGGCAG CGGCGGCTCC CGCGGCTTCG AAACCCGCAG CCAGGAAGGC GGCAGCGCCT 
GCCGCCGCCA AGAAGGCATC GGCCGCCGCG CGCAAGCGAA CGACCGGCCG CCGCTGA
 
Protein sequence
MSNASQPFDF SQFVPGFDFL KNLAGGGAGG AAGSAVPGLP SLASWVAPTL SVEEVDKRIQ 
ELKTVQYWLE QNGHALKATI QALEVQKMTL STLRGMNVRM EDIASAFTKQ AAAVAPAAAP 
APAAAAAPAE PEAEPEEEKA PAPAKKARSK PASAAAASGG NGAAGVIDPM QWWGSLTEQF 
QQIASSALQD AAQLKVPARA QPAAAAPAAS KPAARKAAAP AAAKKASAAA RKRTTGRR