| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0748 |
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| Symbol | |
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| ID | 7971800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 817798 |
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| End bp | 819213 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644791346 |
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| Product | transcriptional regulator, GntR family with aminotransferase domain |
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| Protein accession | YP_002942667 |
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| Protein GI | 239813757 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGACAC GAACCTCCAC CCAGTCGCTC ACGGGGCAAT TGGCCGACCG GCTGGCCGAA
CGCATCCGCA CCCGGCTGCT GCCGCCCGGT GCGCGCCTGC CCTCGGTGCG CGAATGCGCG
CGCCAGCAGG GCGTGAGCCC CTACACGGTG GTGGCGGCCT ACGACCAGCT GCTGGCGCAG
GGCCTGGTCG AGGCGCGCCG CCAGCGCGGC TTCTACGTGC GCGACTCGGC GCCGGCGCAG
GAGGGGCGCC CCCCCAACGC GGCGCCCATG GTGGTCCAGA TGATGGCTTC GCGCGTGCCG
GCCGATGCGA GCTCGCTCAT CCGCAGCATG TTCCACCGGC CCAGCGACAA GCCGCAGCCG
GGCATGGGCG TGTTTCCGCC CGACTGGATG GCCTCCGCCT TCATGCCGAC GGCGGTGCGC
CGCATGACCA GTACAGCTGC GCTGCAGGAA CTGTCGCTCC AGTACGGCGA ACCCTCGGGC
GACGCCGCGC TGCGCCGCAG CCTGTCGAAC AAGCTGGTGG GCATCAACGT GCCCGCCGCG
CCCGACCAGA TCGTGACCAC CGTGGGCGCC ACGCACGCGC TGGACATCGT GAGCCGCACC
CTGCTGCGCG CGGGCGATCC GGTGATGGTC GAGGAGCCCG GCTGGGCGCT GGAATTCGCG
CGGCTCGAGG CGCTGGGCAT GCGCATCCTG CCGGTGCCGC GCCGCGCCGA CGGGCCCGAC
CTGGAGGTGA TGGCGCAGTA CTGCCAGCTG CACAGCCCCA AGCTCTTCGT GAGCGTGAGC
GTGCTGCACA ACCCGACCGG CTACAGCCTC ACGCCCGGCA GCGCGCACCG CGTGCTCAAG
CTGGCCAACG AGCACGACTT CCACATCGTC GAGGACGACA CCTACAGCCA CCTCGCGCCC
GAGCACGCCA CGCGGCTCAG CGCGCTCGAT GGGCTGCAGC GCACCATCTA CGTCAGCGGC
TTCGCCAAGA TCCTGGCGCC CAACTGGCGC ATCGGCTTCC TGGCCGCTTC GCCGGAACTC
AAGGAGCGGC TGCTCGAGAC CAAGCTGCTG GCCACGCTCA CCACGCCCAC GCTGTTCGAG
CGGGCGCTTT CGTGGTGCAT CGACCAGGGG CAGCTGCGGC GGCATGCCGA GCGCATACGC
ATCCGGCTCG ACGGCGCCCG CGGCCGCGCG GTGAAGCTCG CGATGGCGCA TGGCTGCAGC
TTTGCGTCCG AGCCGGCGGG CCTGTTCGGC TGGGTCGACA CCGGCGTCGA CACCGACGCG
CTCACCCAGC GCATGCTCGA CCAGGGCTAC CTGCTCGCGC CGGGCTCGCT GTTCCATGCG
CGGCGGCCGC CGAGCACGAT GATGCGGATC AATTTCGCGA CCTCGCAGGA CGCGGCATTC
TGGAAGGTGT TCAGCAAGGT GCGCGCGGAA CTCTGA
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| Protein sequence | MLTRTSTQSL TGQLADRLAE RIRTRLLPPG ARLPSVRECA RQQGVSPYTV VAAYDQLLAQ
GLVEARRQRG FYVRDSAPAQ EGRPPNAAPM VVQMMASRVP ADASSLIRSM FHRPSDKPQP
GMGVFPPDWM ASAFMPTAVR RMTSTAALQE LSLQYGEPSG DAALRRSLSN KLVGINVPAA
PDQIVTTVGA THALDIVSRT LLRAGDPVMV EEPGWALEFA RLEALGMRIL PVPRRADGPD
LEVMAQYCQL HSPKLFVSVS VLHNPTGYSL TPGSAHRVLK LANEHDFHIV EDDTYSHLAP
EHATRLSALD GLQRTIYVSG FAKILAPNWR IGFLAASPEL KERLLETKLL ATLTTPTLFE
RALSWCIDQG QLRRHAERIR IRLDGARGRA VKLAMAHGCS FASEPAGLFG WVDTGVDTDA
LTQRMLDQGY LLAPGSLFHA RRPPSTMMRI NFATSQDAAF WKVFSKVRAE L
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