| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0747 |
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| Symbol | |
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| ID | 7971799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 817094 |
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| End bp | 817693 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791345 |
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| Product | hypothetical protein |
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| Protein accession | YP_002942666 |
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| Protein GI | 239813756 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTGGC AAGAATTCAC CGCGCTGCTG GTGCTGGCCA CGGCGATGAG TTTCTCGCCC
GGTCCCAACA CCACGCTTTC CACGGCCCTG GCGGCCAACG GCGGCCTGCC GCGCGCCATG
CGCTTCGTGG TGGCCGTGCC GGTCGGCTGG ACGCTGCTGC TGGTGCTGTG CGCGGCCGGC
ATCGGCGCGC TGGTGGTGGC GGTGCCTTCG CTGCGCCTGG GCATCAAGGC GCTGGGTGTG
GGCTACCTGC TGTGGCTGGC CTACAAGCTG AGCGGCAGCG GCACGCTCGG CCGCGCCGAT
GGCGCCAGCC TCGACGTCGG CTTCGGCCAG GGCGTGATGC TGCAGTTCGT CAACATCAAG
GCCTGGCTGC TCGCGCTCAC GCTGGTGGCC GGCTGGATCG CGGGCCAGCC CGATGCGCTC
GGGCGCTTCG CCATCGTCGC GCCGGTGATG CTGGTCTACG CCTTCATCAG CAACTTCACC
TATGCATTGG CGGGCGCGCT GCTGCGCGAA TGGCTCTCCA AGGGCAAGCG CCTGCTGTGG
TTCAACCGCG CGATGGGGTT GGTGCTGGTG CTCACGGCCT GGTGGATGCT GAGCGTATGA
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| Protein sequence | MNWQEFTALL VLATAMSFSP GPNTTLSTAL AANGGLPRAM RFVVAVPVGW TLLLVLCAAG
IGALVVAVPS LRLGIKALGV GYLLWLAYKL SGSGTLGRAD GASLDVGFGQ GVMLQFVNIK
AWLLALTLVA GWIAGQPDAL GRFAIVAPVM LVYAFISNFT YALAGALLRE WLSKGKRLLW
FNRAMGLVLV LTAWWMLSV
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