Gene Vapar_0743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0743 
Symbol 
ID7971795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp813551 
End bp814222 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content71% 
IMG OID644791341 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_002942662 
Protein GI239813752 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAGCC TCGCCACGCT CGCGCTCTTC CTGCTGGCCG TTCTCGCGCT GTTCCTGTCG 
CCGGGGCCGA ACATGGCCTT CGTGCTCTCG CACGGCGTGG CCCATGGGCC GCGCGGCGGC
TTCGCGGCGG CGCTGGGCAT CTCGTCGGCC GACCTGGTGC ACACGCTCTT CGCCGCCACC
GGCGTCACGG CGCTGGTGGC GGCCTGGCCG CCCTCGTTCG ACCTGCTGCG CTACGCGGGC
GCGCTGTACC TGCTGTGGCT CGCGGTGCAG GCCGTCCGCA GCAGCGGCGG CATTCCCACG
GGAGCGCGCG CGCAGCCATC CGCCTTCGCG CGCATCGTGC GCATGGCCTT CCTGAACAAC
CTCGTCAATC CGAAGGCGCT GCTGTTCTTC ATGGTGTTCC TGCCGCAGTT CGTCGACCCC
GCGCGCGGCA GCGTGCCCTT GCAACTGGTG CAGCTCGGCG TCATGCTGTC GGCAGCCGCG
CTCGCGTTCA ACACGCTGCT CGGCGCCTGC AGCGGGCAGC TCGGCCGCTG GCTGCAGCGC
CGTCCGGGGG CTGAAAAGTT CCAGCGCGGC CTGTTGGCCC TGGTGATGGT CGGCCTGGCG
ATCCGCCTGC TGCTGCTCGA CCGTCCCGCC GTGCCATCCG CCCTGTCCGC CACACCTGTC
CAAGGAAGCT GA
 
Protein sequence
MISLATLALF LLAVLALFLS PGPNMAFVLS HGVAHGPRGG FAAALGISSA DLVHTLFAAT 
GVTALVAAWP PSFDLLRYAG ALYLLWLAVQ AVRSSGGIPT GARAQPSAFA RIVRMAFLNN
LVNPKALLFF MVFLPQFVDP ARGSVPLQLV QLGVMLSAAA LAFNTLLGAC SGQLGRWLQR
RPGAEKFQRG LLALVMVGLA IRLLLLDRPA VPSALSATPV QGS