Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0743 |
Symbol | |
ID | 7971795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 813551 |
End bp | 814222 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644791341 |
Product | Lysine exporter protein (LYSE/YGGA) |
Protein accession | YP_002942662 |
Protein GI | 239813752 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAGCC TCGCCACGCT CGCGCTCTTC CTGCTGGCCG TTCTCGCGCT GTTCCTGTCG CCGGGGCCGA ACATGGCCTT CGTGCTCTCG CACGGCGTGG CCCATGGGCC GCGCGGCGGC TTCGCGGCGG CGCTGGGCAT CTCGTCGGCC GACCTGGTGC ACACGCTCTT CGCCGCCACC GGCGTCACGG CGCTGGTGGC GGCCTGGCCG CCCTCGTTCG ACCTGCTGCG CTACGCGGGC GCGCTGTACC TGCTGTGGCT CGCGGTGCAG GCCGTCCGCA GCAGCGGCGG CATTCCCACG GGAGCGCGCG CGCAGCCATC CGCCTTCGCG CGCATCGTGC GCATGGCCTT CCTGAACAAC CTCGTCAATC CGAAGGCGCT GCTGTTCTTC ATGGTGTTCC TGCCGCAGTT CGTCGACCCC GCGCGCGGCA GCGTGCCCTT GCAACTGGTG CAGCTCGGCG TCATGCTGTC GGCAGCCGCG CTCGCGTTCA ACACGCTGCT CGGCGCCTGC AGCGGGCAGC TCGGCCGCTG GCTGCAGCGC CGTCCGGGGG CTGAAAAGTT CCAGCGCGGC CTGTTGGCCC TGGTGATGGT CGGCCTGGCG ATCCGCCTGC TGCTGCTCGA CCGTCCCGCC GTGCCATCCG CCCTGTCCGC CACACCTGTC CAAGGAAGCT GA
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Protein sequence | MISLATLALF LLAVLALFLS PGPNMAFVLS HGVAHGPRGG FAAALGISSA DLVHTLFAAT GVTALVAAWP PSFDLLRYAG ALYLLWLAVQ AVRSSGGIPT GARAQPSAFA RIVRMAFLNN LVNPKALLFF MVFLPQFVDP ARGSVPLQLV QLGVMLSAAA LAFNTLLGAC SGQLGRWLQR RPGAEKFQRG LLALVMVGLA IRLLLLDRPA VPSALSATPV QGS
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