Gene Vapar_0742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0742 
Symbol 
ID7971794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp812904 
End bp813545 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content67% 
IMG OID644791340 
ProductGlutathione S-transferase domain protein 
Protein accessionYP_002942661 
Protein GI239813751 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAATA TCTGGGGCCG CATCAGTTCG ATCAACGTGC GCAAGGTCGT CTGGTGCGCG 
CAGGAACTCG GGCTCGACTT TCAACGCACC GAGGCCGGCG GCCGGTTCGG CGTGGTGCAG 
ACGCCCGAGT ACCTGGCACT CAATCCGAAC GCGATGGTGC CCACCATCGA CGACGGCGAA 
GGCAGCGATC GCGTCACGCT CTGGGAATCG AACGTGATCG TGCGCTATCT CTGCGCCAAG 
CATTCGCACG GCAAGTTCTA CCCGAGCGAA CTGCCCGCGC GCTTCGACGC CGAACGCTGG 
ATGGACTGGC AGCAGACCAC GCTCAACCGC GCGAGCCGCG ACGCCTTCGT GCAATGGGTG 
CGCACGCTGC CGGCCGAGCG CGAACCGGCG TTGATCGCGG CCTCGGTCCA CGCGAGCGAG 
GCGCTGTTCG CCATGCTCGA CACGCATCTT GCACGGCAGC CCTTCATGGC CGGGGACCGG 
TTCACCATGG CCGACATTCC CATCGGCTGC GAGGCGCACC GCTGGTTCGG CCTGCCGCCG 
GCCGAATACC AGCGCCCCAG CTGGCCGAAC CTCGAACGCT GGTACGGCGA ACTGATCTCC 
CGGCCGGGCA CGCGCGGCGT GCTCGACCTC CCGCTCGAAT GA
 
Protein sequence
MLNIWGRISS INVRKVVWCA QELGLDFQRT EAGGRFGVVQ TPEYLALNPN AMVPTIDDGE 
GSDRVTLWES NVIVRYLCAK HSHGKFYPSE LPARFDAERW MDWQQTTLNR ASRDAFVQWV 
RTLPAEREPA LIAASVHASE ALFAMLDTHL ARQPFMAGDR FTMADIPIGC EAHRWFGLPP 
AEYQRPSWPN LERWYGELIS RPGTRGVLDL PLE