| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0741 |
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| Symbol | |
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| ID | 7971793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 811972 |
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| End bp | 812907 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644791339 |
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| Product | phenazine biosynthesis protein PhzF family |
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| Protein accession | YP_002942660 |
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| Protein GI | 239813750 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0384] Predicted epimerase, PhzC/PhzF homolog |
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| TIGRFAM ID | [TIGR00654] phenazine biosynthesis protein PhzF family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGCA TGAAACCCCG CCCGTTCAAA CAAGTCGACG TCTTCACCGC CACGCCCTAC
CTCGGCAATC CGCTCGCCGT GGTGCTCGAC GGCAGCGGCC TGGACGACGC CGAGATGCAG
CGCTTCGCGC AGTGGACCAA TCTTTCGGAA ACCACCTTCC TGCTGCCGCC GACCGAACCC
TCGGCCGACT ACCGCGTGCG CATCTTCACG CCCGGCGGCG AACTGCCCTT TGCGGGCCAT
CCCACCATCG GCAGCTGCCA CGCCTGGTTG CAGGCCGGCG GCAAGCCGAA GGCGGCGGGC
CGGATCGTGC AGCAGTGCGC GGCCGGCCTG GTGCCGCTGC GCCATGAAGG CGAGCGCCTG
GCTTTCTCGG CCCCGCGGCT CAAGCGCAGC GCGCCGAGCC CCACGCTGTT GGCCAAGGTG
GCGGGTGCGC TGGGCCTGAA GGCGCAGCAG GTGGTTGCGG CGCAGGTGCT CGACAACGGG
CCGGTGTGGT TCGGCCTGCT GCTCAGCGAT GCGGACACCG TGCTCCGGCT CGTGCCCGAC
CACCGCATGC TCAAGGAGCT GGGTGTGAAG GCCGGCGTCG CGGGCATGCC TGCCGAGCAG
GGTTCGTCGA TGCTGATCGG CCGCTCGAAC CGCGAGGCGC GCGCCTTCGG CGGCAAGTCT
GCTGCCATCG AAGAAGGCGA AGGCCCGAAG ATCGACCTCG AGGTGCGCGC CTTTGCCGCG
CCCATTGGCG TGGAAGAAGA CCCGGTCACC GGCAGCCTCA ACGCCAGCCT GGCCGAATGG
CTGATCGCCG ACGGCCACAT GCCCGCGCGC TATGTGGCCG CGCAGGGCCA GTGCCTCGGC
CGCTCCGGGC GCGTGTACAT CGAGCGCGTC GCCGACGGCA AGGTGTGGGT CGGCGGCGAT
GCCGTGACCT GCATCGACGG CCAGGTCACG CTGTAA
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| Protein sequence | MKSMKPRPFK QVDVFTATPY LGNPLAVVLD GSGLDDAEMQ RFAQWTNLSE TTFLLPPTEP
SADYRVRIFT PGGELPFAGH PTIGSCHAWL QAGGKPKAAG RIVQQCAAGL VPLRHEGERL
AFSAPRLKRS APSPTLLAKV AGALGLKAQQ VVAAQVLDNG PVWFGLLLSD ADTVLRLVPD
HRMLKELGVK AGVAGMPAEQ GSSMLIGRSN REARAFGGKS AAIEEGEGPK IDLEVRAFAA
PIGVEEDPVT GSLNASLAEW LIADGHMPAR YVAAQGQCLG RSGRVYIERV ADGKVWVGGD
AVTCIDGQVT L
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