Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0735 |
Symbol | |
ID | 7971787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 806728 |
End bp | 807633 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644791333 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002942654 |
Protein GI | 239813744 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.645433 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATTG AAAATCTCTC GGACCTGCAG GTTCTGGTGC AGACCGCCCG CGGCGGCACG CTCACGGCCG CGGCCCATGC GCTCGGCATG ACGCCGGCGG CGGCCAGCGC CACGCTCAAG CGGCTGGAAA CGCAGCTCGG CGCCCGGCTG TTCGAGCGCT CGACCCGCGC CATGCGCCTG ACTTCGCAGG GCCAGACGCT GCTCGACTAC GCGGTGCGCG CCTTCGAGCT GCTGGACGAA GGCGAGTCGC TGGTCACGGC CGAGCGCGGC GAGCTGGTCG GCACCTTGCG CGTGGCTGCC CCATCGGACC TCACGCGCAG CACGCTGCTG CCCTGGTTCG ACGAATTCCT GGCGCTGCAC CCGGGCGTGC AGCTGTCGCT GTCGGTCGGC GACCGGCTGC TCGACGTGAC GCGCGACGAG GTCGACGTGG CGCTGCGCTA CGGCGCGCTG GCCGATTCAC GGCTGGTGGC ACGGCCGTTC GCGCTGACCA ATCCGCTGCT CACCGCATCG CCCGCCTACC TGCGCCGCCA CTCCGCGCCG AAGACGCCGC AAGACCTGGT GCACCACAAC TGCCTCACCT TCGACCGCGG CGGGCGCCGC CACCGCACCT GGCGCTTCGC GCAGAACGGC CAGTGGACCG AAGTGCGCGT GAAGGGCGAC CGCAGCGTCG ACGACGCCTC GCTCGCGCGC GAGTGGGCCG TGGCGGGCTT GGGCATCGTG CTGAAGTCGG CGCTCGACGT GCGCGAAGAC CTTCGCAAGG GCGCGCTGGT GCGGCTGCTG CCCGAATGGG ACACCGAGCC CTATCCGCTG CACGCCCTCT TGCCGAGCGG ACGCTTCGTG CCCGCGCGCG TAAGGGCATT GGTCAATTTC CTGGCGCTGA AGTTCGAGGC GCTGACGGCT GCTTAG
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Protein sequence | MKIENLSDLQ VLVQTARGGT LTAAAHALGM TPAAASATLK RLETQLGARL FERSTRAMRL TSQGQTLLDY AVRAFELLDE GESLVTAERG ELVGTLRVAA PSDLTRSTLL PWFDEFLALH PGVQLSLSVG DRLLDVTRDE VDVALRYGAL ADSRLVARPF ALTNPLLTAS PAYLRRHSAP KTPQDLVHHN CLTFDRGGRR HRTWRFAQNG QWTEVRVKGD RSVDDASLAR EWAVAGLGIV LKSALDVRED LRKGALVRLL PEWDTEPYPL HALLPSGRFV PARVRALVNF LALKFEALTA A
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