| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0726 |
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| Symbol | |
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| ID | 7974689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 794596 |
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| End bp | 796698 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644791325 |
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| Product | primosomal protein N' |
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| Protein accession | YP_002942646 |
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| Protein GI | 239813736 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTGGC GGCTCGACAT CGCGGTGCAG ACGCCCGCGC ATGCCGCGCT CGGCGACCTG
CTGAGCTATG CCAGCCCCGC TCCCCTGGTG CCCGGCACGC TGGTGCGGGT GCCGCTGGGC
CGGCGCGAGG TGCTGGGCGT GGTCTGGAAT CCGCCGGTCT CGCTCGAAAA TGCCGAGCCC
GACATGGCCC TGAAGCCCGT GGGCGCCGCG CTGGACGCGC TGGCCCCGCT CGGCGAGGCC
TGGCGCGACC TCGTCGCCTT TGCCGCGCGC TACTACCAGC GCTCGATCGG CGAGATCGCC
CTGGCCGCGC TGCCGCCGCA GCTGCGCGAC CTGAGCGGAA CGCAGCTGGC GCGCCGCCTC
AAGCGCAAGA CCGCAGCCGG CCCGGTGGCC GAGACGGCCG AGGCCGCCCA CCCGGTCGCC
CTGAGCGCGG AGCAGACCGC CGCGCTGGCC CGCATCGAGG CGGGCGAGGC CGGCACCTTC
CTCCTGGTCG GCAGCACCGG CAGCGGCAAG ACCGAGGTCT ACCTGCGCTG CGTGGCCGAC
CTGCTCGCGG CCGACCCCGG CGCGCAGGCG CTGGTGATGG TGCCCGAGAT CAACCTGACG
CCGCAGCTCG AAGCGCGCTT CAAGGCGCGC TTCGGCGACG ACGCGGTGGT GTCGCTGCAC
AGCGGCATGA CCAACCCGCA GCGGCTCGCG AGCTGGCTCG CGGCGCACAG CGGCGCCGCG
CGCATCGTGC TGGGCACGCG CATGGCGGTG TTCGCGTCGA TGCCGGGCCT GAAGCTCGTG
GTGGTCGACG AGGAGCACGA CCCCAGCTAC AAGCAGCAGG AAGGCGCGCG GTATTCGGCG
CGCGACCTCG CCGTCTGGCG CGGCCAGCGC GAGGGCGCGA AGGTCATCCT CGGCTCGGCC
ACGCCCTCGC TCGAAAGCTG GCACCAGAGC CGCCCCGCCG AGGGCGAGGA CCCGGGCGGG
CGCTATGTGC GGCTGGCCAT GCCGTCGCGC ATCGGCGCCG GCGAGCTGCC CACGGTGCGG
CTGGTCGACA TGAACCTGCA GCCGCCCAAG ACCGTGATCT CGGCCGCGCT GCTCGACGCC
ATCGGCCAGC GCATCGCGCG CGGCGAGCAG AGCATGGTGT TCCTGAACCG CCGCGGCTAT
GCGCCGGTGC TGGCCTGCGC CGACTGCGGC TGGAAAAGCG AATGCCCGCA CTGCAGCGCC
TACCGCGTGT TCCACAAGAT CGACCGCACG CTGCGCTGCC ACCACTGCGG CTTCACCGAG
CGCGTGCCGC GCGCCTGCCC TTCCTGCGGC AACCCCGACA TCGCGCCCGT GGGCCGCGGC
ACCGAGCGGC TCGAAGAACA CCTGGCGGAG CTGTTCGCGG CGGTGACGCG GCCCGACGGC
AGCGCTGTAC GCATCGCGCG CATCGACGCC GACAGCACCA GGAAACAGGG CGCGCTCGAA
TCGCAGCTCG CGGCCGTGCA TTCGGGCGAG GTCGACGTGC TGGTGGGCAC GCAGATGATC
GCCAAGGGGC ACGATTTCCG CCGCATCACG CTGGTGGCGG CGGTGAACCC AGACGGCGCG
CTGTTCTCCA GCGACTTCCG CGCGCCCGAG CGGCTGTTCA GCCTCTTGAT GCAGTCGGCC
GGCCGCGCCG GCCGCGACGC CGCCTACCTG GCGGCGCAGG GCGCCACGGC CGAGATGTGG
ATCCAGACGC ACCATGCGCA GCACCCGCTT TTCTCGGCCC TGCGACGGCA CGACTACACG
GCCTTCGCGC GGCAGCAGCT CGAGGAGCGC GCCGCCGCCG GCATGCCGCC CTTCGCCTTC
CAGGCGCTGC TGCGTGCCGA TGCGCGCACC CAGGAAGCCG CGCAGGCTTT CCTGAACGCG
GCCAGCGCCG CCGCGGACGC GCTGGAAGGC GCCGACCGGG TGGTGCGCTA TCCCGCGGTG
CCGCTGGCGA TCCAGCGCGT GGCCAATGTG GAAAGGGCGC AGATGCTGAT CGAAAGCCCC
TCGCGCGCCG CCTTGCAGCG CCTGCTGGCG CAGTGGCAGC CGCTGCTGCA TGCCCTCAGG
CGCACGCCCG AAGGCAAGGG CGTGATCCGC TGGCTGGTCG ACGTCGACCC GCACAGCATC
TAG
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| Protein sequence | MAWRLDIAVQ TPAHAALGDL LSYASPAPLV PGTLVRVPLG RREVLGVVWN PPVSLENAEP
DMALKPVGAA LDALAPLGEA WRDLVAFAAR YYQRSIGEIA LAALPPQLRD LSGTQLARRL
KRKTAAGPVA ETAEAAHPVA LSAEQTAALA RIEAGEAGTF LLVGSTGSGK TEVYLRCVAD
LLAADPGAQA LVMVPEINLT PQLEARFKAR FGDDAVVSLH SGMTNPQRLA SWLAAHSGAA
RIVLGTRMAV FASMPGLKLV VVDEEHDPSY KQQEGARYSA RDLAVWRGQR EGAKVILGSA
TPSLESWHQS RPAEGEDPGG RYVRLAMPSR IGAGELPTVR LVDMNLQPPK TVISAALLDA
IGQRIARGEQ SMVFLNRRGY APVLACADCG WKSECPHCSA YRVFHKIDRT LRCHHCGFTE
RVPRACPSCG NPDIAPVGRG TERLEEHLAE LFAAVTRPDG SAVRIARIDA DSTRKQGALE
SQLAAVHSGE VDVLVGTQMI AKGHDFRRIT LVAAVNPDGA LFSSDFRAPE RLFSLLMQSA
GRAGRDAAYL AAQGATAEMW IQTHHAQHPL FSALRRHDYT AFARQQLEER AAAGMPPFAF
QALLRADART QEAAQAFLNA ASAAADALEG ADRVVRYPAV PLAIQRVANV ERAQMLIESP
SRAALQRLLA QWQPLLHALR RTPEGKGVIR WLVDVDPHSI
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