| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0722 |
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| Symbol | |
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| ID | 7974685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 790921 |
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| End bp | 791934 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644791321 |
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| Product | Auxin Efflux Carrier |
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| Protein accession | YP_002942642 |
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| Protein GI | 239813732 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0679] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGCCTG TATTTCTCGT AACTTTTCCT TTCTTCGCGC TGATCGCGGC CGGCTACGGC
GCCGCGCGCG CCCGCATCCT GCCGCTGGAC GCGATTCCGG GCCTCAACAC CTTCGTGCTG
TACTTTGCGC TGCCCTGCAT GCTGCTGCGC TTCGGCGCCG GCACGCCGAT CGGGCAGCTG
CTCGACGGCA GCGTGGCACT GGTCTGGGGC CTGAGCGCGC TGGCGGTGGT GGCGGGCGTG
GTGATCTTTA CCCGCAATGC GCGCATCGGC TGGAACGACG GGGCCTTCGG CGCGCTGGTG
GCGGCCTTTC CGAACACCGG CTTCATGGGC GTGCCGCTGC TGGTGGCGCT GCTGGGCGCG
CAGGCCGCGG GGCCGATGAT CATCACCATC GCGTTCGACC TGGTCGTGAC TTCTTCGCTG
TGCATTGCGC TGTCGCGCCT GGACGGCGCA GGCGGGCAGC ACGGCCCGCG GCTGGCCGCG
CGCCAGGCGC TGCGCGGCGT GCTGGTCAAT CCGATGCCGT GGTCGATCCT GCTGGGCGTG
CTGCTGTCGG CGGCGCGCTG GCGCCTGCCG GGGCCGGTGG AGCGCACCAT CGCCATGCTG
GCCGATGCGG CCTCGCCGGT GGCGCTCTTC ACCATCGGCG CGGTGCTGGC GCGCTCGGCG
CTGCTCGCGC GCGAGCACGG CGCCAGCGCG GCCGTGGCGG CCGCCATGGG CACGAAGTCG
GCGCTGCCTC CCAAGGCGCC GCTGGCCGAC GTGCTGCCGG TGGTGGCGGT CAAGCTGCTG
GTGCATCCGG TGCTGGTGTG GGCGGTGGGG CAGGGGGGCA TTGCGCTCGG CCTGCCGCTG
TCTTCTTCGG CGCTGATGGT GATCGTGCTG GTGGCGGCGT TGCCGAGCGC GAGCAACGTC
TCGATGCTGG CCGAGCGCTT CGGGGCCGAC AACGGCCGCA TCGCACGCAT CATCCTGTGG
ACGACGGTGG CAACCTTCTT CAGCTTTCCG TTCGCGGTCG GCGTGCTGCG CTGA
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| Protein sequence | MLPVFLVTFP FFALIAAGYG AARARILPLD AIPGLNTFVL YFALPCMLLR FGAGTPIGQL
LDGSVALVWG LSALAVVAGV VIFTRNARIG WNDGAFGALV AAFPNTGFMG VPLLVALLGA
QAAGPMIITI AFDLVVTSSL CIALSRLDGA GGQHGPRLAA RQALRGVLVN PMPWSILLGV
LLSAARWRLP GPVERTIAML ADAASPVALF TIGAVLARSA LLAREHGASA AVAAAMGTKS
ALPPKAPLAD VLPVVAVKLL VHPVLVWAVG QGGIALGLPL SSSALMVIVL VAALPSASNV
SMLAERFGAD NGRIARIILW TTVATFFSFP FAVGVLR
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