| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0721 |
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| Symbol | |
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| ID | 7974684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 788695 |
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| End bp | 790800 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644791320 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_002942641 |
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| Protein GI | 239813731 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTCCG GTCTCAATCT CGCGCAACAA GAAGCTGTCA ACTACCTGCA CGGCCCCTGC
CTGGTGCTGG CGGGCGCGGG CTCGGGCAAG ACGCGCGTCA TCACGCACAA GATCGGCCGG
CTGATCCAGG CCGGCCTGGA GCCCAAGCGC ATCGCGGCCA TCACCTTCAC CAACAAGGCC
GCGAGCGAAA TGCGCGAACG CGCCAAGGGG CTGATCGGGC GCGAGGCGAA GCACGTGGTG
ATCTGCACCT TCCACGCGCT GGGCGTGCGC ATGATGCGCG AGGACGGCGC CGTGCTGGGC
CTGAAGCCGG CCTTCAGCAT CCTGGACAGC GACGACGTCA CCAAGATCCT CAAGGACGCG
GGCGGCACCA CCGACACCGC CACCGCGCGC ATCTGGCAGT GGACCATCAG CAAATGGAAG
AACATGGGCC TGAACGCCGC GCAGGCGGAA GCCGCCGCGG CCGACGACAA CGAGCGCATC
ACCGCGCGCA TCATGGCGCG CTACGAAGAG CGGCTCACGG CCTACCAGAG CGTCGACTTC
GACGACCTCA TCGGCATGCC GCTCAAGCTG CTGCGCGATT TCGACGAAGT GCGCGCCAAG
TGGCAAGCCG CGCTGGGCCA CATATTGGTG GACGAATACC AGGACACCAA CGCCACGCAG
TACGAAGTGC TGAAGGCGCT GGCCGGCGAG CGCGGGCGCT TCACCGCGGT GGGCGACGAC
GACCAGTCGA TCTACGGCTG GCGCGGCGCC ACGCTGGACA ACCTGCGCAA GCTGCCGGTC
GACTACCCGG CGCTGAAGGT CATCAAGCTC GAGCAGAACT ACCGCTCCAC CAGCGCGATC
CTGCGCGCGG CCAACAACGT GATCGGTCCC AACCCCAAGC TGTTTCCGAA GACGCTGTTC
TCCGAGCTCG GCGAAGGCGA GCCGGTGCGC GTGGTCGATG CCGACTCCGA AGCGCACGAG
GCCGAGCGCG CGGTGGCGCG CATCGTCAGC CTGCGCGCGG GCGACACCGC CATCGAGGGC
AAGCAATACA AGGAGTTCCG CGACTTCGCC ATCCTCTACC GCGCCAACCA CCAGGCGCGC
GTGTTCGAGC AGGCGCTGCG CAAGGCGCAG ATTCCCTACA AGGTGTCGGG CGGCCAGAGC
TTCTTTGACC GCGCCGAGAT CAAGGACCTG TGCGGCTGGT TCCGCCTCTG GGTCAACAAC
GACGACGACC CGGCGTTCCT GCGCGCCATC ACCACGCCCA AGCGCGGCAT CGGCCACACC
ACGCTCGCGA GCCTGGGCAC CTTTGCGAGC CAGTACAAGC TGAGCCTGTT CGAGGCGCTG
TTCAGCCCGT CGCTGCCGAG CGTGATGCCC AAGCGCACGC TCGAGGGCAT CCACGAGTTC
GGCCGCTACA TCAACGACCT CGAATACCGC GCGCGCCGCA CCATGGGCGC GGAAGACTCG
CGCACCTTCA TGCTCGACTG GCTCAAGGAG ATCGACTACG AGAAGCATCT CTACGACGGC
GAGGACAGCG AACAGGCCGC GGCCGCGCGC TGGACCAACG TGATGGAATT CGTCGACTGG
ATGTCGCAGC GCGCCGGCGG CACCATCGAC GACGCCTCGG GCGCCGACGG CAACATCGAG
ACCGAGCGCA AGAGCCTGCT CGAGGTGGCG CAGACCATCT CGCTGCTGTC GACCATCAGC
GAGCGCGAGC AGGACCAGAA CGTGGTCACG CTGTCCACGC TGCATGCCTC CAAGGGCCTC
GAATGGCCGC ACGTGATGCT GATCGGCGTG ACCGAGGGCC TGCTGCCCTT CAAGCTCGAG
GACGACAACG GCCGCCAGCT CCAGGTGAGC GACGACACGC TGCAGCGGCT GCAGGAAGAG
CGCCGCCTGA TGTACGTGGG CATCACGCGC GCGCAGCGCA GCCTGGCCGT GAGCTGGACC
AAGAAGCGCA AGCAGGGCCG CGAGATGGTG CCCTGCGTGC CGAGCCGCTT CATCGCCGAG
ATGGGCCTGG ACAAGGCCAC CACCCGCGAA GACCCGCGCG AGAAGCTCAA GGCGCTGCGC
GCCGAGTTCG CGCGCAAGGC ACAGGACAGC GCGGCCGCCA AGGCCGCGGC TGCGGCGGCG
CCATGA
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| Protein sequence | MSSGLNLAQQ EAVNYLHGPC LVLAGAGSGK TRVITHKIGR LIQAGLEPKR IAAITFTNKA
ASEMRERAKG LIGREAKHVV ICTFHALGVR MMREDGAVLG LKPAFSILDS DDVTKILKDA
GGTTDTATAR IWQWTISKWK NMGLNAAQAE AAAADDNERI TARIMARYEE RLTAYQSVDF
DDLIGMPLKL LRDFDEVRAK WQAALGHILV DEYQDTNATQ YEVLKALAGE RGRFTAVGDD
DQSIYGWRGA TLDNLRKLPV DYPALKVIKL EQNYRSTSAI LRAANNVIGP NPKLFPKTLF
SELGEGEPVR VVDADSEAHE AERAVARIVS LRAGDTAIEG KQYKEFRDFA ILYRANHQAR
VFEQALRKAQ IPYKVSGGQS FFDRAEIKDL CGWFRLWVNN DDDPAFLRAI TTPKRGIGHT
TLASLGTFAS QYKLSLFEAL FSPSLPSVMP KRTLEGIHEF GRYINDLEYR ARRTMGAEDS
RTFMLDWLKE IDYEKHLYDG EDSEQAAAAR WTNVMEFVDW MSQRAGGTID DASGADGNIE
TERKSLLEVA QTISLLSTIS EREQDQNVVT LSTLHASKGL EWPHVMLIGV TEGLLPFKLE
DDNGRQLQVS DDTLQRLQEE RRLMYVGITR AQRSLAVSWT KKRKQGREMV PCVPSRFIAE
MGLDKATTRE DPREKLKALR AEFARKAQDS AAAKAAAAAA P
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