| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0718 |
|---|
| Symbol | nadE |
|---|
| ID | 7974681 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | - |
|---|
| Start bp | 786196 |
|---|
| End bp | 787044 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644791317 |
|---|
| Product | NAD synthetase |
|---|
| Protein accession | YP_002942638 |
|---|
| Protein GI | 239813728 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0171] NAD synthase |
|---|
| TIGRFAM ID | [TIGR00552] NAD+ synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.451004 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCACG ACCTGTCTCC CGTCGACGCC GCGCAGCGCG AGATCATCGC GGCGCTGCAC
GTCGCGCCCG TCTTCGACGC CGCCGCGGAA ATCGAGCGGC GCACCGCCTT TCTCGCGGAC
TACCTGCGGG GCACCGGCCT CAAGGCGCTG GTGCTGGGCA TCAGCGGCGG CGTCGATTCG
CTGACGGCCG GCTGCCTCGC GCAGCGCGCC GTCGAGAAGC TGCGCGCCGA GGGCTACGGC
GCCACCTTCA TCGCGATGCG CCTGCCCTAC GGCGTGCAGA AGGACGAGCA CGAGGCGCAG
GCCTCGCTCT CGGTGATTCG GCCCGACCGC ATCCTGACCG TCGACATCCG CCCCGCGGCC
GACGGCATGC TCGCGGCGCT CAAGAAGGGC GACCTGGCCT TCCGCGATGC GGCGCATGAA
GACTTCGTGC TCGGCAACAT CAAGGCGCGC CAGCGCATGA TCGCGCAGTT CGCGGTGGCC
GGTGCGCACG ACGGCATCGT CATCGGCACC GACCATGCGG CCGAGGCGCT GATGGGCTTC
TTCACCAAGT TCGGCGACGG GGCGGCCGAC GTGACGCCGC TCAGCGGCCT CGACAAGCGC
CGCGTGCGCG CCCTCGCGCA GCGGCTCGGC GCCCCCGACG CGCTGGTGTT CAAGGTGCCC
ACGGCGGACC TCGAATCGCT GGTGCCGGGC AAGCCCGACG AAGACGCCTT CGGCGTGAGC
TACGAACAGA TCGACGATTT CCTCGAAGGC AAGCCGGTGG CCGCCGCGGC GCGCGAGATC
ATTCTTGCCA CGCATCGCAA GAGCGCCCAC AAGCGCGCGC TGCCGGTGGA GCCGCCGCAC
CCGGCCTAG
|
|---|
| Protein sequence | MTHDLSPVDA AQREIIAALH VAPVFDAAAE IERRTAFLAD YLRGTGLKAL VLGISGGVDS
LTAGCLAQRA VEKLRAEGYG ATFIAMRLPY GVQKDEHEAQ ASLSVIRPDR ILTVDIRPAA
DGMLAALKKG DLAFRDAAHE DFVLGNIKAR QRMIAQFAVA GAHDGIVIGT DHAAEALMGF
FTKFGDGAAD VTPLSGLDKR RVRALAQRLG APDALVFKVP TADLESLVPG KPDEDAFGVS
YEQIDDFLEG KPVAAAAREI ILATHRKSAH KRALPVEPPH PA
|
|---|
| |