| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0711 |
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| Symbol | |
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| ID | 7974674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 775066 |
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| End bp | 775980 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791310 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002942631 |
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| Protein GI | 239813721 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCTTC ACACGCTGCA GGAAAGCGCG GTCCGCTACT TCCTGGAGGT GGTCAGGACC
GGGTCGGTGA AGGACGCGGC GCTCAAGCTC AACGTGGCGC CTTCGGCCGT GAGCCGGCAG
GTGGCGCGCC TGGAGCGCGA ACTCGACACG CTGCTGTTCG ACCGGCACGC GCGCGGCATG
GTGCCCAATG CGGCCGGCGA ACTGCTGGCC GCGCATGCCA AGCGGGTGCA GCAGGACATC
GAGCGCGTGG CCGGCGAGAT CCAGGGCCTG CGCGGCCTGC GCAGCGGGCG CGTGCGCGTG
GCGAGCACCG AGGGCTTCGC GTTCGACTTT CTTCCCACGC TGATCTCGCG CTTTCGCGCG
AAGCATGAAG GCATCCGCTT TCACCTGGAG GTCTGCCCGC CCCACGAGAT TCCCGGCCGC
ATCCGCGACG GCGAAGCGGA CGTGGGCATC ACGCTGAGCG CGGTGCCCGA GCCCGGCATC
CGGATCGAGC TGCGCCACCC GAGCCCGATC CTCGCCGTGA TGGCGAGCGA CCATCCGCTG
GCGGGGCAGC GGCAGCTCTC GTTGCGCCAG GTGGCGGCCT ATCCGCTGGG CCTGCCGCCG
CGGGACAGCT CGATACGGCA GCTGCTGGAC ATCAGCTGCA GCCGGCAGGG GCTGCAGTAC
GTGCAGGCCA TGTCGAGCAA CCATGCGAAT GCGCTGGTGA GCTTTGCGGC CGCGGGCGGC
GGCACCATCG CCTTCTATGG CGAGCTGTCG ATCCGCACGC AGCTCAAGTC GAAGGCGCTG
GTGGCCATTC CGCTGAAGGA CCGCGAGATG AACGAGCGCC ACCTCGAAGT CGAGACGCTC
GCAGGCCGTT CATTGCCCGA TGCAGGCAAG GCTTTCGTGC GGTTTTTGAC GGATGCCATC
AAGGCCTCGG CCTGA
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| Protein sequence | MSLHTLQESA VRYFLEVVRT GSVKDAALKL NVAPSAVSRQ VARLERELDT LLFDRHARGM
VPNAAGELLA AHAKRVQQDI ERVAGEIQGL RGLRSGRVRV ASTEGFAFDF LPTLISRFRA
KHEGIRFHLE VCPPHEIPGR IRDGEADVGI TLSAVPEPGI RIELRHPSPI LAVMASDHPL
AGQRQLSLRQ VAAYPLGLPP RDSSIRQLLD ISCSRQGLQY VQAMSSNHAN ALVSFAAAGG
GTIAFYGELS IRTQLKSKAL VAIPLKDREM NERHLEVETL AGRSLPDAGK AFVRFLTDAI
KASA
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