| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0708 |
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| Symbol | |
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| ID | 7974671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 770061 |
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| End bp | 772271 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644791307 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_002942628 |
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| Protein GI | 239813718 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCACG CGCATTCCGG AGCGCCGCAG CACCCGCATC ACGAAGGCCA CCACGCGCCG
CATGACCACA CGCCTGTGCC TGTGCCTGCG CCCGCCGGCA CCATCTACAC CTGCCCGATG
CATCCGGAGA TCCGGCAGGA CCATCCGGGC AACTGCCCCA AGTGCGGCAT GACGCTGGAG
CCCGAGATGC CGACGCTCGA CGAGGGCGAA GACCCCGAGC TGCGCGACTT CAAGCGCCGC
TTCCTTTGGA CGCTGCCGCT CACGCTCGCG GTGGCCGTGC TCGCGATGGC GGGGCACCGG
CTGCAGTGGT TCGAGATGGC CACGCAGAGC TGGATCGAGC TGGTTCTTTC GCTACCCATC
GTGCTGTGGG CGGGCTGGCC CTTCTTCAGG CGTGCCGTGC AATCGGTCGC CAACCGCAGC
CCCAACATGT GGACGCTCAT CGGCCTGGGC ACCGCGGCCG CCTTCGTCTA CAGCGTGGTG
GCCACGGTGG CGCCGCGCGT GTTTCCCGAA TCGTTCATGT CGATGGGCCG CGTGGCGGTG
TACTTCGAGG CGGCCGCGGT GATCATCTCG CTCACGCTGC TGGGCCAGAT CCTCGAACTC
AAGGCGCGCT CGCAGACCTC GGCGGCGATC AAGTCGCTGC TCGGCCTCGC GCCCAAGACG
GCGCGGCGCA TCGGCGCCAA TGGCACGGAA GAAGACGTGC CGATCGCCCA CGTGCACGTC
GGCGACAAGC TGCGCGTGCG GCCCGGCGAG AAGGTGCCGG TGGACGGCGT GGTGGTCGAG
GGCGCGAGCG CGGTCGACGA GTCGATGCTC ACCGGCGAGC CGCTGCCCGT GACCAAGCGG
GCCGGCGACA AGCTCATCGG CGCCACGCTC AACACCAGCG GCGCGCTGGT GATGCAGTCG
GAAAAGGTCG GCTCGCAGAC CGTGCTCGCA AGCATCGTGC AGATGGTGGC GCAGGCCCAG
CGCTCCCGCG CGCCGATGCA GCGCATGGCC GACCACGTGG CCGGCTACTT CGTGATGGCC
GTGATCGGCA TCGCGGTGCT GACCTTCTTT GCGTGGGGCT TCTTCGGGCC GGCGCCGAGC
TGGACGCACG GGCTCATCAA TGCGGTGGCG GTGCTCATCA TTGCCTGTCC CTGCGCGCTC
GGCCTGGCCA CGCCGATGTC GATCATGGTG GCCACGGGCA AGGCGGCCAC GCAGGGCGTG
CTGTTCCGCG ATGCGGCCGC GATCGAGAAC TTCCGCAAGG TCGACGCGCT CATCGTCGAC
AAGACCGGCA CGCTGACCGA AGGCAAGCCG GGCTTCGAAC GTGCGGTGGC GCTGCCCGGC
TTCAGCGAGG ACGAGGTGCT GCGCCTCGCG GCAAGCCTCG ACCAGGGCAG CGAGCATCCG
CTCGCGCACG CCATCGTGCG TGCGGCGCGC GAGCGCGGGC TTGCGCTGGC CGCGGCCGAC
GAGTTCGAGT CCGCCAGCGG CATCGGCGTG AACGGCAGCG CCGGCGGCCG CCGGCTGGCG
CTCGGCAACA CCGCGCTGAT GGACCAGCTG GGCGTGCCGG TCGATGCGCT CCGGCCGCAG
GCCGAGGCGC TGCGCGCCGA GGGAGCCAGC GTGATGTTCC TCGCGGTCGA CGGCCAGCCC
GCCGGCCTGC TGGCCGTGTC CGACCCGGTC AAGGCCACCA CGGCGGAAGC GCTCGCGGCG
CTCAAGGCAT CGGGCATGCG CGTGATCATG GCCACGGGCG ACGGCCTGAC CACCGCGCGC
GCCGTGGCCG CCAGGCTGGG CATCGACGAG GTGCACGGCG AAGTCAAGCC GGCCGACAAG
CTGGCGCTGG TCGAGAAGCT GCAGCGCGAA GGCCGCATCG TCGCGATGGC CGGCGACGGC
ATCAACGATG CGCCCGCGCT CGCCAAGGCC GATGTCGGCG TGGCCATGGG CACCGGCACC
GACGTCGCGA TGAACAGCGC CCAGGTGACG CTGGTCAAGG GCGACCTGCG CGGCATCGCG
CAGGCACGCA TCGTCTCCGA GAAGACCATC GCCAACATGA AGCAGAACCT GGGCTTCGCG
TTCGTCTACA ACGCACTGGG CGTGCCGCTG GCTGCGGGCG TGCTGTTCCC GTTCACGGGC
TGGCTGCTGT CGCCGATGAT CGCGGCGCTG GCGATGAGCC TGAGATCGGC GTCGGTCATC
ACCAATGCAT TGCGGCTGAG AGCCGAGGGC ACGGGCGGCA GGCCGGGCTG A
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| Protein sequence | MNHAHSGAPQ HPHHEGHHAP HDHTPVPVPA PAGTIYTCPM HPEIRQDHPG NCPKCGMTLE
PEMPTLDEGE DPELRDFKRR FLWTLPLTLA VAVLAMAGHR LQWFEMATQS WIELVLSLPI
VLWAGWPFFR RAVQSVANRS PNMWTLIGLG TAAAFVYSVV ATVAPRVFPE SFMSMGRVAV
YFEAAAVIIS LTLLGQILEL KARSQTSAAI KSLLGLAPKT ARRIGANGTE EDVPIAHVHV
GDKLRVRPGE KVPVDGVVVE GASAVDESML TGEPLPVTKR AGDKLIGATL NTSGALVMQS
EKVGSQTVLA SIVQMVAQAQ RSRAPMQRMA DHVAGYFVMA VIGIAVLTFF AWGFFGPAPS
WTHGLINAVA VLIIACPCAL GLATPMSIMV ATGKAATQGV LFRDAAAIEN FRKVDALIVD
KTGTLTEGKP GFERAVALPG FSEDEVLRLA ASLDQGSEHP LAHAIVRAAR ERGLALAAAD
EFESASGIGV NGSAGGRRLA LGNTALMDQL GVPVDALRPQ AEALRAEGAS VMFLAVDGQP
AGLLAVSDPV KATTAEALAA LKASGMRVIM ATGDGLTTAR AVAARLGIDE VHGEVKPADK
LALVEKLQRE GRIVAMAGDG INDAPALAKA DVGVAMGTGT DVAMNSAQVT LVKGDLRGIA
QARIVSEKTI ANMKQNLGFA FVYNALGVPL AAGVLFPFTG WLLSPMIAAL AMSLRSASVI
TNALRLRAEG TGGRPG
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