| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0702 |
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| Symbol | |
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| ID | 7974665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 762378 |
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| End bp | 763457 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644791301 |
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| Product | glycosyl transferase group 1 |
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| Protein accession | YP_002942622 |
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| Protein GI | 239813712 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATCG CGCAGATCGC GCCCCTGTAC GAAGCCGTTC CGCCGCGGCT CTATGGCGGC
ACCGAACGGG TCGTTGCCCA CCTGGCCAAT GCGCTGGTGG ACCAGGGCCA CGAGGTCACG
CTGTTCGCCT CCGCGGACAC GCAGACCCGG GCCCGCCTGG CGCCCATGCG GGCCCAGGCC
CTGCGGCTGG ACCCGGCGCC GCTGAAGTCC GACCTGGCCA GCCACCTCTG CATGCTCCAC
GAAGTGCGAC GACGAGCGCA CGAGTTCGAC GTGCTGCATT TCCACGTCGA CCTGCTGCAC
TTTCCCTTCT TCGAGGACAT GGCCGGCCGC ACCCTCACCA CGCTGCACGG GCGCCTGGAC
ATCGCGGACC TGCCCGGCGC GTACATGCGC TGGAACCAGT TTCCGCTGGT CTCCATCTCG
CGCCACCAGC GCAAGCCGCT GCCCTTTGCC AACTGGCTCG CGACCATTCC GCACGGACTC
GAAGAGACGC CCTACGCCTT CGAGCCGAAC CCCGGCGGCT ACCTGGCCTT CCTTGGCCGC
ATCTCGCCCG AGAAGCGGCC CGACCGCGCC ATCGAGATCG CCAGGCGCGC GGGGCTGCCG
CTGAAGATCG CGGCCAAGGT CGACGCGGCG GACGCGAGCT ACTTCGCGCA GAAGATCCGG
CCGCTGCTGG ACGATCCGCT GGTCGAGTTC ATCGGCGAGA TCGGCGACGC CGACAAGGCC
GCGTTCCTGG GCGGCGCGCG CGCGCTGCTG TTCCCGATCG ACTGGCCCGA GCCCTTCGGC
CTGGTGATGA TCGAGGCCAT GGCCTGCGGC ACGCCGGTGA TCGGCTGGCG CTGCGGCTCG
GTGCCCGAGG TGATCGAGCA TGGCGTGAGC GGGCTCATCG TCGAGGACGA GGCGCAGGCC
GTCGAGGCGG TGCACGCCAT TGGCGCGCTC GACCGCCGCC GCGTGCGGCA GGCCTTCGAG
CGGCGCTACT CGGCCCAGGC CATGGCCAGC GCCTATGTCG AGCAGTACGC GCGGCTGGCC
GGCGGCGGCG CGCTCCTGCC GCAGGAGCCG CACGAGCCCC TCTACCGCGA GGCCGCCTGA
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| Protein sequence | MKIAQIAPLY EAVPPRLYGG TERVVAHLAN ALVDQGHEVT LFASADTQTR ARLAPMRAQA
LRLDPAPLKS DLASHLCMLH EVRRRAHEFD VLHFHVDLLH FPFFEDMAGR TLTTLHGRLD
IADLPGAYMR WNQFPLVSIS RHQRKPLPFA NWLATIPHGL EETPYAFEPN PGGYLAFLGR
ISPEKRPDRA IEIARRAGLP LKIAAKVDAA DASYFAQKIR PLLDDPLVEF IGEIGDADKA
AFLGGARALL FPIDWPEPFG LVMIEAMACG TPVIGWRCGS VPEVIEHGVS GLIVEDEAQA
VEAVHAIGAL DRRRVRQAFE RRYSAQAMAS AYVEQYARLA GGGALLPQEP HEPLYREAA
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