| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0699 |
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| Symbol | |
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| ID | 7974662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 758480 |
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| End bp | 759328 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644791298 |
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| Product | extracellular solute-binding protein family 3 |
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| Protein accession | YP_002942619 |
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| Protein GI | 239813709 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTCAA GCTGCCGGAC TGACTTCGCG CGCGCCGCCT GCGCTGCCCT CCTGCTCGCG
CTGGCGGGTG CGCTGCCCCG TGCCGGCGCG CAGGAGCCAG CCGCCGCATT GCGCGTCTGC
GCGGAGCCCG ACAACCTGCC CTACTCGCGC GAGGATCAGA GCGGCTTCGA GAACCGCATC
GCACGCCTGC TGGCCGACGA CCTGGGTCTG CCGCTGCAGT ACGCATGGCT GCCCGACCGG
CGCGGCTTCG TGCGCAAGAC GCTCGGCGCC CATGCCTGCG ACGTGATCAT CGGCGTGCCC
GCGGGCGACG AGCGCGTGCT GGCCACGAGG CCCTACTACC GCTCGAGCTA TGTGTTCGTG
CAGCCCGCAG CGCGGGCCGA GATGGCCGAT GCGCTGCGCT CCTTCGACGA TGCCCGCCTG
CCCGCGCTGC GCATCGGCGT GCAGCTGGTG GGCAACGACC TGGCCGCGAC GCCGCCGGGC
CATGTGCTGG CGCGGCACGA TGCGGTGCGC AACGTGGTCG GCTTCACCGT GTCCGGCGAC
GGGCCGCCCG CGCAGCGCAT GGTGGAGGCG GTGGCGCAGG GCGAGCTCGA TGCGGCCGTG
GTCTGGGGGC CGCAGGCGGG CTACTTCGCG GCCCGCGCCA CACCGGCGCT GCGGCTCACG
CCGGCCGCGG CGCCCGGCGA TCCGGACCTG CCTTTCAGCT TCTCGATTGC AATGGGCGTG
CGCAAGGACG ACCGCGCGAT GAAGGCGCGG CTCGACGATT TCCTGCTGCG GCGCGGCGCC
GACATCGACC GCATCCTCGA TGCCTATGCG GTGCCGCGCC TTCCCGTCTC GAACGGGGAG
CCGCCATGA
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| Protein sequence | MPSSCRTDFA RAACAALLLA LAGALPRAGA QEPAAALRVC AEPDNLPYSR EDQSGFENRI
ARLLADDLGL PLQYAWLPDR RGFVRKTLGA HACDVIIGVP AGDERVLATR PYYRSSYVFV
QPAARAEMAD ALRSFDDARL PALRIGVQLV GNDLAATPPG HVLARHDAVR NVVGFTVSGD
GPPAQRMVEA VAQGELDAAV VWGPQAGYFA ARATPALRLT PAAAPGDPDL PFSFSIAMGV
RKDDRAMKAR LDDFLLRRGA DIDRILDAYA VPRLPVSNGE PP
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