Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0698 |
Symbol | |
ID | 7974661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 757914 |
End bp | 758483 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644791297 |
Product | cytochrome c class I |
Protein accession | YP_002942618 |
Protein GI | 239813708 |
COG category | [C] Energy production and conversion |
COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAACGC CGCCGCTGCG GATGGCCGGC ACCGCGGTGC TCGCGCTCGC ATCGAGCCTG GCGCTGTGCG CCTGCGAGCG CGAGATGCGC CGCTTCGAGA CGCCGCCCGA CAACCGCGCG GCGCCGCGCC CCGAAGCACC GAGGACCAGC GCGCTGCAGC CGGCCGAGGC GCGCAGCGAT CCGGTGCGCC TGCCGGCGGG CAACGGCGAA GGCTACGAAG ACAACGCCTA CAACGTGGCG CAGGGCAAGC GCCTGTACCG CTGGTACAAC TGCGCCGGCT GCCACGCGCA GGGCGGCGGC GGCATGGGGC CCGCGCTCAT CGACGACCAG TGGCGCTACG GCAGCGAGCC GGCGCAGGTC TTCAGCACCA TCATGCAGGG GCGGCCCAAC GGCATGCCTT CGTTCGGCGG GCACCTGAGC GAGGACCAGG TGTGGCAGCT CACCGCCTAT GTGCGCTCGA TGAGCGGCCA ACTGCGCAAG GACACGGCCC CCGGCCGCGC CGATGCCCTG CAGGCCAACG AACCGGAAGC CGCGCGCGAC CGCGAACCCG CGCGCCCGGG AGCGAAATGA
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Protein sequence | MRTPPLRMAG TAVLALASSL ALCACEREMR RFETPPDNRA APRPEAPRTS ALQPAEARSD PVRLPAGNGE GYEDNAYNVA QGKRLYRWYN CAGCHAQGGG GMGPALIDDQ WRYGSEPAQV FSTIMQGRPN GMPSFGGHLS EDQVWQLTAY VRSMSGQLRK DTAPGRADAL QANEPEAARD REPARPGAK
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