Gene Vapar_0695 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0695 
Symbol 
ID7974658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp754356 
End bp754961 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content68% 
IMG OID644791294 
Productputative cytochrome c oxidase subunit I 
Protein accessionYP_002942615 
Protein GI239813705 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCGC CACGGCGCGA GCTCGACGTC TCGGCCCTGC CGAGCTATGC CTTCGGCCAC 
CGCAGCCTGA TGTGGTGGGG CACCTTCGGC CTGATCGCGA TCGAGGGCAC GATCTTCGCA 
ATCGCCATCG GCGCCTACCT GTACCTGCGC AGCCAGGCGG ACAGCTGGCC CCTCGGCGCG 
CCGCCGCCCG ACCTGCTGTG GGGGTCGGCC AACACGCTGA TCCTGCTCGC GAGCATCTGG 
CCGAACCAGA AGGCCAAGCG CGCGGCCGAA GCCCGCGACC TGGTGCGCAC GCGCGGCTGG 
CTGCTGGTGT GCCTGCTGTT CGCGCTGGCC TTCCTGGTGC TGCGGGGCTT CGAGTTTGCG 
GCGTTGCACA CGCGCTGGGA CCACAACGCC TACGGCTCGG TCGTGTGGAC GCTGCTCGGG 
CTGCACACGG TGCACCTGCT CACCGACACC TACGACACGG CCGTGCTGGA CGTGCTGCTG 
TTCACCGGCC CGATGGAAGG CCAGCGCTTC GTCGACGTGA GCGAGAACGC GCTGTACTGG 
TACTTCGTCG TGTTCTCCTG GCTGCCGATC TACGCGGTGA TCTATGGCGT GCCGCGCCTT 
CATTGA
 
Protein sequence
MTAPRRELDV SALPSYAFGH RSLMWWGTFG LIAIEGTIFA IAIGAYLYLR SQADSWPLGA 
PPPDLLWGSA NTLILLASIW PNQKAKRAAE ARDLVRTRGW LLVCLLFALA FLVLRGFEFA 
ALHTRWDHNA YGSVVWTLLG LHTVHLLTDT YDTAVLDVLL FTGPMEGQRF VDVSENALYW 
YFVVFSWLPI YAVIYGVPRL H