Gene Vapar_0689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0689 
Symbol 
ID7974652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp749790 
End bp750512 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content70% 
IMG OID644791288 
Productdienelactone hydrolase 
Protein accessionYP_002942609 
Protein GI239813699 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.722387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTGAAG TGCCTCGCGC AAAGGAAGCC AAATTGGACC CCCCATCCAG AACCTTCGAG 
CGCCGCGCGC TCCGCATTCC GCTGCGCTCT TCCGTCACGC TGGAGGCCGA CCTGTGCCTG
CCTGCGGCCT CGCGCGGGAT CGTGCTGTTT GCGCATGGCA GCGGCAGCAG CCGCTTCAGC
CCGCGCAACC GACAGGTCGC GGAGAGCCTC AACGAGGCGA AGCTGGCCAC GCTGCTCGTC
GACCTCCTGA CCTCCGACGA AGAGGCCGTC GACGAGCGCA CGCGCGAGCT GCGCTTCGAC
ATCGACATGC TGGCCGACCG GCTCGTCGGC CTGACCGACT GGCTGTGCGA CTACGAGCCC
GCCGCGGGCC TGAGGATCGG CTACTTCGGC GCGAGCACCG GTGCGGGTGC CGCGCTGATG
GCGGCGGCGC AGCGGCCCGA CGCGGTGCAC GCCGTGGTCT CGCGCGGCGG GCGGCCCGAC
CTGGCCGGGC CCGCGCTCGA GCGCGTGCGC GCGCCCACGC TGCTGATCGT CGGCGGCAAT
GACGGGCCGG TGATCGACAT GAACTGGCAA GCCCTTGCGG TGCTGCACGG CGAGAAGCGG
CTTTCGCTCG TGCCCGGTGC CACGCATCTT TTCGAGGAAC CCGAAGCGCT GGGCGCGGTG
TCCAAGCTGG CGCGCGACTG GTTTCGGGAC CATCTCGATC CCTCCAGGAG TACCAAGAAA
TGA
 
Protein sequence
MCEVPRAKEA KLDPPSRTFE RRALRIPLRS SVTLEADLCL PAASRGIVLF AHGSGSSRFS 
PRNRQVAESL NEAKLATLLV DLLTSDEEAV DERTRELRFD IDMLADRLVG LTDWLCDYEP
AAGLRIGYFG ASTGAGAALM AAAQRPDAVH AVVSRGGRPD LAGPALERVR APTLLIVGGN
DGPVIDMNWQ ALAVLHGEKR LSLVPGATHL FEEPEALGAV SKLARDWFRD HLDPSRSTKK