Gene Vapar_0688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0688 
Symbol 
ID7974651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp749089 
End bp749580 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content59% 
IMG OID644791287 
ProductActivator of Hsp90 ATPase 1 family protein 
Protein accessionYP_002942608 
Protein GI239813698 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTCG AGATCACGAA AGCACCCGTC GCACAAACGG AGATGCTGGT TCGCAAGCCC 
GTCGCAGAGG TGTTCGGGGC GTTCATCGAT CCCCGTGCGA CAACCAACTT CTGGTTCACC
AAAAGCAGCG GCCGGCTCGA GGCCGGCCGT GAAGTCAGAT GGGACTGGGA GATGTATGGA
GCATCCACAT CGGTGCTCGT GAAAGACATC GAACCCGACA AGCGCATCGT GATCGAGTGG
GACGGATACA GCGGCCGCAC GACGGTCGAA TGGACGTTCT CCGAACGCGA GGATGGAACG
ACCTACGTCG TCATCACGGA GTCTGGATGG ACGGGTGATG GCGACGAACT CTTCAAGTAC
GTTGCCGAGT CGACCCAAGG CTTCACCTGG ACGCTTGCAG GACTCAAGGC GTTTCTCGAG
CATGGCATCA AGCTGAATCT TGTGGCGGAC AAGAACCCCG ATGCGCTCAA GGCAGGCTGG
CAGCGGGCCT GA
 
Protein sequence
MKVEITKAPV AQTEMLVRKP VAEVFGAFID PRATTNFWFT KSSGRLEAGR EVRWDWEMYG 
ASTSVLVKDI EPDKRIVIEW DGYSGRTTVE WTFSEREDGT TYVVITESGW TGDGDELFKY
VAESTQGFTW TLAGLKAFLE HGIKLNLVAD KNPDALKAGW QRA