Gene Vapar_0679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0679 
Symbol 
ID7974642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp737961 
End bp738605 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content56% 
IMG OID644791278 
Producthypothetical protein 
Protein accessionYP_002942599 
Protein GI239813689 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGTCG AAGGCTTTGC CCCAGCGCAT GACTGGATTC AGGCACGTGC TTACCGTGAG 
GCGCTGATCA AGTACCTCAA TCGTGATTTG CCGAAGGTGA TTCAGTCGCA GAAGGATCGG 
GATGCGAAGA AGAAGCCCAA GCCGATTGCC GGATACATCA TCGGCACCGA GTATGGAATC 
GAGACCGGTT GGCACTTTCA CGTCGCGCTG TTCTTGAACG GCGATGATCA TCAGAACGAA 
GTCGGCATTG CGTCAAGGAT CTGCTGGACG TGGAAGAACG AGATCACGAG CAGCAACGGT 
CGCTACTACA ACTGCAATCT CGCAGCAAGG GAAGGTAGGT ACAGCAAGGT GGGCGTGGGC 
ATGATTCACC GACACGACTT GGCCAAGCGC GAGATTCTGA GCAGCGTGGT CACACGCTAC 
GCTGTAAAGG GCTGCTACTA CGCGGATGCC CAGACAGGAA CCAAGGACCG CCTGCTGAAC 
AAGGGAGGTT GGCCGAAGGA AAAGGACCTG AGAAAAGGAG GGCGTCCTGA GAAGCCGGTG 
CAGGTGCAGC GGGAACTGCT GACGCACGTG TTTTCCGAGA AGAAGAAACG CTTCTTCCCG 
ATCTGGACGT CGTGTGAACC GTCTCAACCG CGGGTGGGTT ACTGA
 
Protein sequence
MFVEGFAPAH DWIQARAYRE ALIKYLNRDL PKVIQSQKDR DAKKKPKPIA GYIIGTEYGI 
ETGWHFHVAL FLNGDDHQNE VGIASRICWT WKNEITSSNG RYYNCNLAAR EGRYSKVGVG 
MIHRHDLAKR EILSSVVTRY AVKGCYYADA QTGTKDRLLN KGGWPKEKDL RKGGRPEKPV 
QVQRELLTHV FSEKKKRFFP IWTSCEPSQP RVGY