| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0678 |
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| Symbol | |
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| ID | 7974641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 737132 |
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| End bp | 737614 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644791277 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002942598 |
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| Protein GI | 239813688 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTGCT TTCCGACGAT CTTCCTGCTA CTGGCGGTCG CGGCGCTGAT TGAGCCTTCG
GTCACGTCCA TCGTCGTTCT CATCGCTGTG GCCAGCTGGA TGGAGGTCGC TCGCGTGGTC
GAAGGGCAGA TCCGGTCACT GCGCGAGCGG GACTTCGCGC TTGCTGCCGA GTCGCTGGGC
GCCAGCGACT CAAGGATCAT GTTCCGCGAG CTGCTGCCCA ATGCGGTGGC GCCTATCGTC
GTAGCGGCCA CGCTCAACAT CGCCCACGCG ATCCTGGCGG AGTCGTACAT CAGCTTCCTC
GGATTCGGCA TCCATCCTCC GACGCCGAGC TGGGGAAACA TGCTGGAGAA CGCGCAGAGC
TACCTGACCA ACGCGCCGTG GCTCGCGATC GTGCCAGGCG TGGCGATCGC ACTGACCGTG
ACGAGCTTCA ACTTCATCGG CGACGGACTG CGTGATGCGC TGGACGCCAA ACTGGATCGT
TGA
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| Protein sequence | MLCFPTIFLL LAVAALIEPS VTSIVVLIAV ASWMEVARVV EGQIRSLRER DFALAAESLG
ASDSRIMFRE LLPNAVAPIV VAATLNIAHA ILAESYISFL GFGIHPPTPS WGNMLENAQS
YLTNAPWLAI VPGVAIALTV TSFNFIGDGL RDALDAKLDR
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