| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0673 |
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| Symbol | |
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| ID | 7974636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 733791 |
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| End bp | 734474 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644791274 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_002942595 |
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| Protein GI | 239813685 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2910] Putative NADH-flavin reductase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTCCG ATCATTTTTT ACATTCGCCG CAGCCCTCCG CACGCTTGAA AGTCGCGCTT
GTGGCACCCA CGGGAAGAAT TGGTTCTGAG ATCGCAAAAG AAGCCTTGCG TCAGGGTCAC
GAAGTCATCG GCGTTGTGCG TTCAAATCGC GCAATACCTG AGGGGCTGGA AGGCATCACC
TTGAAAGCGG TTGATATCTC CGATACTTCG GCGTTTGCCG GAGTATTCAA GGGGGCAGGT
GTGTTAGCCA GCGCCTATGG GGCGCACGGG AACGACATCG GCACGGTCGT CGATGCCGCC
GAATTCATCA TTGCGGCTGC GCGGGCTGCC GATACCAGGC GCACTATCAT GGTTGGAGGC
GCAGGCTGCT TGGAGGTGGC CCGTGGCGCG CTGTTGGTTG ATACGCCAAC CTTCCCGCTG
CCTATAGACC GTATGCATTG GCACACGACC GTGCGTTCCG TCTATTCAGA TCAGCCGACG
ATCTTGACTG GACGTTCTTC TCGCCGGGCA GCAGAAATCG GTCCTAGAGG GAAGCTGGGA
AACTACAAGG TGGCGCCGAA GGCTCAACAA ACCAATGTCG AGGGTCTCAG CAAAATTTCC
TACCCCGACT ACGCTGAAGC ATTCGTGGCT GAAATTGTTC AAGGGAAGTT CATAAAGGAA
ATCATGACCA TCGCCTACAA ATGA
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| Protein sequence | MKSDHFLHSP QPSARLKVAL VAPTGRIGSE IAKEALRQGH EVIGVVRSNR AIPEGLEGIT
LKAVDISDTS AFAGVFKGAG VLASAYGAHG NDIGTVVDAA EFIIAAARAA DTRRTIMVGG
AGCLEVARGA LLVDTPTFPL PIDRMHWHTT VRSVYSDQPT ILTGRSSRRA AEIGPRGKLG
NYKVAPKAQQ TNVEGLSKIS YPDYAEAFVA EIVQGKFIKE IMTIAYK
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