Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0651 |
Symbol | |
ID | 7974614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 709758 |
End bp | 710243 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644791254 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_002942575 |
Protein GI | 239813665 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCAACG ATCAGCCCTT CGTCGGCGCC TACCTGCCGG CCCTTCTGGC CCAGGCCTCG CACCTCATCT CGACCGAGTT CCACGCCATC GTCCAGGCCA ACGGCCTTTC CGTACTTGAA TGGCGCGTGC TGGCTACGCT GGCCGACAGC GGCCCCATCA ACATCGGGCA GTTGGCCCAG CAGAGCGTGA GTAAGCAGCC CACGGTCACG CGCCTGCTCG ACCGTATGGA ACAGCAAGGC TACGTGGAGC GCCTGTCGGC CGCCAAGGAT CGGCGCCTCA CGATGGTGCG AATGACGCGC GCAGGCGACA AGATGATTGC GGGGCTGATC CGCGAGGCCC ATGCGCACGA GGCTTCCGTG CTGGAGCCCC TCGGCGCCAA GCGATCGAAG GAACTCAAGA AGGTGCTGCG CGAGCTGATC GCGCTTCACC GCCCGGCCCT GACCGCGCCG CCCGAACCCG GCGCGCCGGA CCGCAAGGCC CGCTGA
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Protein sequence | MPNDQPFVGA YLPALLAQAS HLISTEFHAI VQANGLSVLE WRVLATLADS GPINIGQLAQ QSVSKQPTVT RLLDRMEQQG YVERLSAAKD RRLTMVRMTR AGDKMIAGLI REAHAHEASV LEPLGAKRSK ELKKVLRELI ALHRPALTAP PEPGAPDRKA R
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